Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02262 ATGGCTGCTCCAACGGCAAGGGCTCGTGCCGATTATGATTATCTCATAAAGCTTCTCTTGATTGGTGACAGCGAGGTTGAAATGCAAATGTGTGTTGACTTTAGTGCATATAAATTAAGCTCCAAAATGATGGCAGTTGTTGATGTTTCCCAAAGGATTAGAAGTGTTGGAAAAAGTTGTCTCCTTCTGCGTTTTTCTGATGGTTCTTTCACTACTAGTTTCATCACAACTATTGGGAATTGGATTCGCAATATTGAGCAACATGCTTCAGACAATGTTAACAAAATACTGGTTGGGAACAAGGCTGACATGGATGAAAGCAAAAGGGTTGTGCCTACATCCAAGGGCCAAGCACTGGCCGATGAATATGGAATCAAATTCTTTGAAACTAGTGCAAAGACAAATCTAAATGTTGAAGAAGTTTTCTTCTCAATAGCAAGAGATATAAAACAAAGGTTGGCTGACACTGATTCCAAGGCAGAGACCAATCAGGAGGACTTGGGGAAGCTGCACAAAAATCGTCTTGCTGTGGTTGAGGACAGATGTTATAAATTGGAGGCAACGTTCTTGTCCAAGAACATGTAG 585 0.4085 MAAPTARARADYDYLIKLLLIGDSEVEMQMCVDFSAYKLSSKMMAVVDVSQRIRSVGKSCLLLRFSDGSFTTSFITTIGNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAETNQEDLGKLHKNRLAVVEDRCYKLEATFLSKNM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02262 194 Gene3D - 7 80 IPR027417 -
Spst2g02262 194 SMART rho_sub_3 55 152 IPR001806 GO:0003924|GO:0005525
Spst2g02262 194 Pfam Ras family 78 150 IPR001806 GO:0003924|GO:0005525
Spst2g02262 194 ProSiteProfiles small GTPase Rab1 family profile. 1 182 - -
Spst2g02262 194 PANTHER LD44762P 11 79 - -
Spst2g02262 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 154 IPR027417 -
Spst2g02262 194 ProSiteProfiles small GTPase Ras family profile. 1 190 IPR001806 GO:0003924|GO:0005525
Spst2g02262 194 SMART rab_sub_5 54 152 - -
Spst2g02262 194 Gene3D - 81 182 IPR027417 -
Spst2g02262 194 SMART ras_sub_4 54 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02262 Spst-Chr2 21786300 21789520 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02262 K07901 - fve:101298141 197.208