Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02211 ATGGAAAGGGAAAAGTGGAAAGGGAATTGCAATAGCAACAGCAACATCAATGGGTACTATTACGACAGGGTTGGGTGTGATTATTACATCGGAGAGGTGCCCAGCAGAGAACGTAGCCCTACCAAGGCTTCTTCGCCTCCCAGACTTGGATACATCGAACACCATGTTTCCAAATTCGATACCTTGGCTGGTGTCGCTATCAAGTATGGTGTTGAGGTTGCAGACGTCAAAAAGTTGAATAACCTAGTTACAGATCATCAAATGTTTGCCCTTAAAACTCTCCACATTCCGCTACCTGGAAGGCACCCTCCATCTCCTTGTTTATCAAATGGTTCCAGTACTCCTGGATATGGTAACTCAGATTATAGTTCTCCTACTCAGGCACACAGTGAACTGCTTGATTCATTCCAATCCCTGAGAATAAAGTCATCTGACCGGAGAGTCTCACCAGCCATGATCTCATTACAGGGTTACTATGGACTTAAAGGGTCCTCATGTCCCACTGAAGATGGTAATACACCTATGTCTGAAAGACCTTTGAGTTGTCACCGAAAATCTAAAAGTTTGGTCAATGTAATTTTGGAAGAGATCATGGAAAAATCGAATGGTGCACCAGCGGCAAAAACCAGGGAAATTGACTCCACTAAATGGAATGACAAACTTGTCCAGAGACGTCAGAAATCTGTAGCTGACTTTACCAGGATACCAGAGTTGCGTTTGAGGGAGGATAATAGCAACACTGGTGTTCTTCCGTCAAGAACTGGAAAAGGCTTAGCTCTGAGACAGAAAGCACCTAGCCGAAACTCAATGGTAACTGATTCTGAAAATAATGGTTTGAATCCTGTGGCAATGGGTATGGGGGATGCTTCACTAAATGTTGGTTCATCTGGGGTGAGGAAATCATCAAGTACTTCCTGTTTACATGATCAAGATAACAGTGGCTCCTCTTCCATTTGGCCAACATCAATGTGGAATTTGAAACCAGACTTGCAAGCCCTCTCAACTGCAGCCATTGGAAAACCAATATTTGATGGCTTGCCCAAGCCAATAACTGGTCGAAAAAATAAAGCTGCACTTGATTAA 1083 0.4349 MEREKWKGNCNSNSNINGYYYDRVGCDYYIGEVPSRERSPTKASSPPRLGYIEHHVSKFDTLAGVAIKYGVEVADVKKLNNLVTDHQMFALKTLHIPLPGRHPPSPCLSNGSSTPGYGNSDYSSPTQAHSELLDSFQSLRIKSSDRRVSPAMISLQGYYGLKGSSCPTEDGNTPMSERPLSCHRKSKSLVNVILEEIMEKSNGAPAAKTREIDSTKWNDKLVQRRQKSVADFTRIPELRLREDNSNTGVLPSRTGKGLALRQKAPSRNSMVTDSENNGLNPVAMGMGDASLNVGSSGVRKSSSTSCLHDQDNSGSSSIWPTSMWNLKPDLQALSTAAIGKPIFDGLPKPITGRKNKAALD 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02211 360 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 35 282 IPR045030 -
Spst2g02211 360 MobiDBLite consensus disorder prediction 294 320 - -
Spst2g02211 360 MobiDBLite consensus disorder prediction 244 276 - -
Spst2g02211 360 SUPERFAMILY LysM domain 52 97 IPR036779 -
Spst2g02211 360 CDD LysM 60 96 IPR018392 -
Spst2g02211 360 Gene3D LysM domain 38 103 IPR036779 -
Spst2g02211 360 MobiDBLite consensus disorder prediction 106 128 - -
Spst2g02211 360 SMART LysM_2 53 97 IPR018392 -
Spst2g02211 360 MobiDBLite consensus disorder prediction 102 128 - -
Spst2g02211 360 ProSiteProfiles LysM domain profile. 52 96 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02211 Spst-Chr2 21298033 21300932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02211 - - pvu:PHAVU_003G005400g 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02211 2 21298033 21300932 Spst2g02211 2 21298033 21300932 ECH