Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02195 ATGAAAGCAATCCAATCTGCCTACATTATCGCCACATTCCATGCAAGAGTGCTGTCTGCGGGCAGCATTGGTTGGTCTTTCCGCTGTGATGGGTACACAGAAGGAAGAGTAAAAGAAGACCGTGTCTGTTTGCGTGCGTCACTATTACGTGACCAGTTCCTCGAACGCCCCACACTAGACCCAGTGCCCCCCACCGCATCCCTCCCAAACGACGTCGTCCTCCCCTCCGCATTCGGCAAGTTCCTCCGCCAGCGCCGCCACGACCTGTCGTCAGCAATCTCGCGCGGGATCTCCACGCTGAAGCACCAAGACGATGGCGCTTCGAAGAACAACGGCGTGACGGAGTTCAACCTCTCGGGACTGAAGGTCTTCGTTACGATCAGAAACGAGGCGTCGTCCCCGCAGCGGCGGATCAGCTTCTTCTCGCGCTCGAATTGCAGAGAGTGCGGCGCGGTGCGGAGGTTCTTCAGAGAGCGCGCGCTGAGGTTTGTGGAGATAAATGTGGACGTGTTCGTGGAGCGGGAGAAGGAGTTGAGGGAGAGAACGGGGAGCGCGACGGTGCCGAAGATTTTCTTCGGCGACAGACTGATCGGAGGTCTGGTGGAGTTGAACGTGCTGCGGAAGGATGGCGGCGAGGAGTTAGAGAGGAGGCTGAGGGAGGCGAAAGGGGAGGGGCCGGCAGCGCCGGCGTATGGATTCGACGAGGCGGTGGAGGAAGCGGAGGATGAGGAGGTTTGGAAGGTGGTTAGGGTTTTGAGACAGAGGTTGCCAATTCAGGATAGGGTGATGAAGATTAAAATTGTGAGGAATTGTTTCGCCGGGAGCGAGTTGGTGGAGCTTCTTGTTCGCCACCATGGCTACGCTCCTTCCAAGGCTGTTGAGATTGGAAAACAGCTATGCAAGAAGCATTTCATCCATCATGTTTTCGGGGAAATTGATTTTGAGGAGGGAAACCACTTATATAGGTTCATTGAGCACGAACCCTTTATCTCCAAATGCTTTAACTTCCGCGGTGTCACAAGTGATAGTGAACCGAAGGCTGCAGCTGCAGTGTGTGATAGGCTCACCAAGATCATGTGTGCCATTCTTGAGTCTTATGCTTCTGAAGACAGGCAACGTGTTGATTATGTGACCATTAGCAAAAGTGAAGAATTTCGTAGGTATGTAAACATGACCCAAGATCTACAGAGGGTGAATCTCTTGGAACTATCAGAAAACGAGACGCTTGCCTTCTTCTTAAATTTGTACAATGCCATGATCGTCCATGCTATCATTAGAGTAGGGTGTCAAGAAGGTGTAATTAACAGGAGATCCTTCTCTGATTTCCAGTACTTGATTGGAGGGCACCCTTTTTCTCTTAGTACTATAAAAAATGGTATCCTCAGAAGCAATAGGAGGTCACCATACTCCTTAATCAAACCCTTTGGCTCAGGAGACAGGCGCTTAGAGCTTTCTCTTGTCAAACTGAATCCGTTAGTTCACTTTGGCCTTTGTAATGGCACGAAGTCGAGCCCAAAGGTGAGGTTTTTCTCACCCTACAGAGTTGCAGAAGAATTGAGATGTGCAGCTAGAGAGTTTTTTGAGAATGACGGAATTGAAGTGGACTTGGAGAAGAGGACAATTCATCTCACTCCAATTTTCAAGTGGTACTCTGGGGATTTCGGACAAGAGAGAAACATACTGAAGTGGATAATAAATTACTTGGATGCAAATAAAGCAGGTCTTTTGACACATCTCTTAGGTGATGGTGGTCGTGTTGATATCTGCTACATGACTTATGATTGGTCAATAAATTCCTGA 1800 0.4956 MKAIQSAYIIATFHARVLSAGSIGWSFRCDGYTEGRVKEDRVCLRASLLRDQFLERPTLDPVPPTASLPNDVVLPSAFGKFLRQRRHDLSSAISRGISTLKHQDDGASKNNGVTEFNLSGLKVFVTIRNEASSPQRRISFFSRSNCRECGAVRRFFRERALRFVEINVDVFVEREKELRERTGSATVPKIFFGDRLIGGLVELNVLRKDGGEELERRLREAKGEGPAAPAYGFDEAVEEAEDEEVWKVVRVLRQRLPIQDRVMKIKIVRNCFAGSELVELLVRHHGYAPSKAVEIGKQLCKKHFIHHVFGEIDFEEGNHLYRFIEHEPFISKCFNFRGVTSDSEPKAAAAVCDRLTKIMCAILESYASEDRQRVDYVTISKSEEFRRYVNMTQDLQRVNLLELSENETLAFFLNLYNAMIVHAIIRVGCQEGVINRRSFSDFQYLIGGHPFSLSTIKNGILRSNRRSPYSLIKPFGSGDRRLELSLVKLNPLVHFGLCNGTKSSPKVRFFSPYRVAEELRCAAREFFENDGIEVDLEKRTIHLTPIFKWYSGDFGQERNILKWIINYLDANKAGLLTHLLGDGGRVDICYMTYDWSINS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02195 599 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 256 323 IPR000591 GO:0035556
Spst2g02195 599 Gene3D Glutaredoxin 132 222 - -
Spst2g02195 599 ProSiteProfiles Glutaredoxin domain profile. 126 225 - -
Spst2g02195 599 Pfam Glutaredoxin 140 197 IPR002109 -
Spst2g02195 599 SMART DEP_3 252 325 IPR000591 GO:0035556
Spst2g02195 599 SUPERFAMILY "Winged helix" DNA-binding domain 244 340 IPR036390 -
Spst2g02195 599 CDD DEP 246 322 - -
Spst2g02195 599 ProSiteProfiles DEP domain profile. 252 325 IPR000591 GO:0035556
Spst2g02195 599 Pfam Protein of unknown function, DUF547 402 526 IPR006869 -
Spst2g02195 599 Gene3D - 238 375 IPR036388 -
Spst2g02195 599 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 73 598 - -
Spst2g02195 599 SUPERFAMILY Thioredoxin-like 136 210 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02195 Spst-Chr2 21054268 21061798 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02195 - - pvu:PHAVU_003G007200g 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02195 2 21054268 21061798 Spst2g02195 2 21054268 21061798 ECH