Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02154 ATGCCAGAGGTTTTCACTGTGAAGGTTGAGGAGGGAAGGCCTGCAACTGATGCAAAGCCATCAGCTGGTCCTGTCTATAGGAGCATTTATGCTAAAGATGGTCTCTTGGAGGTTCCTTCTGATTTCGAGTCCCCTTGGGATTTCTTCAGGAACTCTGTTAAGAGGAACCCCAACAACAAAATGCTGGGTAGGCGTCAAAAAGCAGAATCTAAGGTGGGTTCCTATGCGTGGCTTACATATCAAGAGGTTTATGATGCTGCCTTGAAAATGGGTTCTGCCATGAGGAGCCGTGGTCTCAATCCAGGAGATCGTTGCGGCATATATGGGTCCAACTGCCCTGAATGGATCATTGCAATGGAGGCTTGCAATAGCTGTGCAGTGTCATATGTTCCTTTATATGATACCCTTGGTCCTAACGCGGTGGAGTTTATCATAAATCATGCTGAAGTTTCAATAGCATTCGTTCAGGAAAAAAAAATTCCATCAATTTTGTCATGTCTTGCGCAGTGTTCTTCAAATCTTAAAACTATTGTGAGCTTTGGAAGTGTTTCAACCACCCAAAAGAAGGAAGCCGAGGAGCATGGTGTGTCCTGCTTCTCGTGGGGAGAGTTTCTCAAGTTGGGATGTCTGGATTGGGATCTACCATCGAAAAAGAAATCTGACATTTGCACAATAATGTACACAAGTGGAACAACTGGAGATCCCAAAGGCGTCGTTATTAAGAATGAGGCTTTCATGGCTGAAGTGTTGTCTGTTGATCACATAATTATGTTAACAGACAGAGTGGCAACAGAAGACGATGTATACTTCTCCTTTCTTCCTCTTGCTCATGTATATGACCAAATAATGGAGACCTATTGCATCTCCAAGGGCTCATCAATAGGATTTTGGCAAGGCGATGTCAGGTTCTTACTGGAAGATGTTCAGGCACTGAAACCAACTATATTTTGTGGTGTTCCTAGAGTTTTTGATCGTATTTGTTCTGGTATCAAAAGCAAACTTTCTTCAGCAGGAGCAGTGCAAAGTACATTGTTTCAGTGTGCTTACAACTACAAGTTAAAATATCTGGAGAAGGGTCTTCCACAACACAAAGCAGCACCTCTGTTTGATAGGCTTGTGTTTGATAAGACAAAACAAGCACTAGGAGGACGTGTTCGCATCCTGTTATCAGGAGCTGCTCCTTTGCCTAGGCACGTGGAAGAGTTTATGAGGGTCACTAGTGGATCTACATTATCACAAGGATATGGTCTCACTGAAAGTTGTGCCGGGTGTTTCACGGCCATAGGTGATGTGTATTCTATGACAGGAACCGTGGGAGTCCCAATGACAACCATTGAAGCAAGGCTTGAATCTGTTCCAGAGATGGGATATGATGCTCTCTCCAACGTAGCCCGCGGAGAAATTTGTCTGAGAGGAAATAGCTTATTCTCTGGTTATCACAAGCGTGAAGATCTTACCAAAGAGGTTATGGTTGATGGTTGGTTTCACACAGGAGATATTGGAGAATGGCAACCAAATGGAGCCATGAAAATTATTGATAGAAAGAAGAATATCTTTAAATTGTCTCAAGGAGAATATATTGCTGTGGAGAATATTGAAAACAAGTATTTGCAATGCCCCCTTATAGCATCGATTTGGGTGTATGGAAACAGCTTTGAGTCATTCTTGGTGGCTGTTGTGGTCCCTGAAAGAAAGGCCATTGAGGATTGGGCACTAATGCACAATGTGAGTGATGATTTTAAATCATTATGCAATAATCTGAAAGCAAGAAAGTACATTTTGGATGAGCTCAACAGCACTGGTCTGAAACACCAACTTAGGGGATTTGAGCTACTAAAAGCCATTCACCTGGAACCAAATCCCTTTGACATAGAGCGAGATTTAGTAACTCCAACTTTCAAATTGAAGAGACCACAATTGGTCAAGTACTACAAGGATCAAATTGATCAATTATACAAAGAAGCAAAGGGAGCAATGGTGTGA 1983 0.4241 MPEVFTVKVEEGRPATDAKPSAGPVYRSIYAKDGLLEVPSDFESPWDFFRNSVKRNPNNKMLGRRQKAESKVGSYAWLTYQEVYDAALKMGSAMRSRGLNPGDRCGIYGSNCPEWIIAMEACNSCAVSYVPLYDTLGPNAVEFIINHAEVSIAFVQEKKIPSILSCLAQCSSNLKTIVSFGSVSTTQKKEAEEHGVSCFSWGEFLKLGCLDWDLPSKKKSDICTIMYTSGTTGDPKGVVIKNEAFMAEVLSVDHIIMLTDRVATEDDVYFSFLPLAHVYDQIMETYCISKGSSIGFWQGDVRFLLEDVQALKPTIFCGVPRVFDRICSGIKSKLSSAGAVQSTLFQCAYNYKLKYLEKGLPQHKAAPLFDRLVFDKTKQALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTIEARLESVPEMGYDALSNVARGEICLRGNSLFSGYHKREDLTKEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERKAIEDWALMHNVSDDFKSLCNNLKARKYILDELNSTGLKHQLRGFELLKAIHLEPNPFDIERDLVTPTFKLKRPQLVKYYKDQIDQLYKEAKGAMV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02154 660 Gene3D - 32 514 IPR042099 -
Spst2g02154 660 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Spst2g02154 660 SUPERFAMILY Acetyl-CoA synthetase-like 40 654 - -
Spst2g02154 660 CDD LC-FACS_euk 73 653 IPR045311 GO:0004467|GO:0006631
Spst2g02154 660 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 652 - -
Spst2g02154 660 Pfam AMP-binding enzyme 52 522 IPR000873 -
Spst2g02154 660 Pfam AMP-binding enzyme C-terminal domain 532 599 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02154 Spst-Chr2 20522344 20528190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02154 5 656 Acyl Lipid Metabolism Gene Families AT1G64400 56.269 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02154 K01897 - gmx:100795926 1274.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02154 2 20522344 20528190 Spst2g02154 2 20522344 20528190 ECH