Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01996 ATGCCTACTCCTCAGAGTTGGAAAAAAGCCTATGGCGCTCTCAAAGACACCACCAAAGTCGGTCTCGCTCATGTCAGCAGCGACTATGCGGACTTGGAAGTTGCCGTAGTCAAAGCCACCAACCACGTCGAGTGTCCTCCCAAAGAGAGACACCTTCGAAAAATTTTGCTCGCAACTTCTGCTGTACGGCCTAGAGCAGACGTTGCGTACTGCATTCATACGCTTTCGCGTCGGTTGGCCAAGACGCGAAACTGGACGGTGGCATTGAAAACATTAATTGTCATTCATAGGTTATTGAGAGAGGGTGATCCTACTCTTAGAGAAGAATTTCTTAATTTCTCAAGGAGGGGCCGCATACTCCAACTTTCTAACTTCAGAGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCCTGGGTTCGTACTTATGCATTATATTTGGAAGAAAGACTTGAATGTTTCTGGATTCTGAAGTATGATATTGAAGCTGAGCGTCTAACTAAGCCTGTTGCTGGGCAAGAGAAGGGGCACAGCAGGACAAGGGACTTGAATAGTGAGGAACTATTGGAGCAATTGCCTGCTTTACAACAGCTGCTCTATTGCCTTGTTGGTTGTCGTCCAGAAGGAGCAGCTGTTAGCAGCTATGTCATACAATTTGCCCTGGCCCTGGTTCTAAAAGAAAGCTTTAAAATTTATTGTGCCATTAATGACGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCCCAAACATGAAGCTATCAAAGCCTTTGATGTTTATAAACGTGCAGGCCAGCAGGCAGAAAGTCTCTCTGATTTCTATGAAATATGCAAAAGATTGGAAATTGCTAGGAATTTTCAATTTCCTGTTTTAAGAGAGCCTCCACAATCATTTCTTGTGACCATGGAAGACTACATAAAGGACGCACCGCGAGTGATTACGGTTTCAATTGAGCCATTATTACTGTTGACTTACAGACCAAATGATGTTCCCACAATAGAATACGATAAATTATCTGAAGAACAGGAGCCATCTGTGCCTGTTGTTGATGTTGCCTCAAATTATGAGCTTGCTCCTCCTCCTCCACCTCACAACGATTTTGAAACTGGAGACTTACTGGGGTTGAATGACAGTACACCAGATGCATCCTTGATAGAAGAAAGAAGCGATCTTGCCCTAGCCATAGTCCCTACTGAAACTGATTCACGTGCTGCTCCAGCTACAGATTTTGATCCAACTGGATGGGAGCTTGCTCTAGTCTCCACTCCATGTACAGCTATTGCTTCAGTCAATGAAAGAGAATTGGATGGTAGATTGTCTTCTCTCAACCTTAACAGTTTGTATGATCAAGGAGCATATAGGTCTGCAAAACAAACTGTTTTTGCAGTTCCAGCCCCAAATCCATTTGAAGTGCAAGATCCTTTTGTTTTGTCAAGTGGCAACCCTCCCCCACCCACTGTACAAATTGGAGCAATTTCTCAACAGCATATAAATCCTTTCGCTCATCACCAACCATATCAGCCACTGCAGATGCGCCCAGCAAATCCCTTTGAGGATGCCGGATACGGGGCCTTTCCTGTGTATCCCGTTTCTCACCCTCTTAGTAACAATCCATTTGGAAGCACTGGCACGATATAG 1641 0.4424 MPTPQSWKKAYGALKDTTKVGLAHVSSDYADLEVAVVKATNHVECPPKERHLRKILLATSAVRPRADVAYCIHTLSRRLAKTRNWTVALKTLIVIHRLLREGDPTLREEFLNFSRRGRILQLSNFRDDSSPIAWDCSAWVRTYALYLEERLECFWILKYDIEAERLTKPVAGQEKGHSRTRDLNSEELLEQLPALQQLLYCLVGCRPEGAAVSSYVIQFALALVLKESFKIYCAINDGIINLVDKFFEMPKHEAIKAFDVYKRAGQQAESLSDFYEICKRLEIARNFQFPVLREPPQSFLVTMEDYIKDAPRVITVSIEPLLLLTYRPNDVPTIEYDKLSEEQEPSVPVVDVASNYELAPPPPPHNDFETGDLLGLNDSTPDASLIEERSDLALAIVPTETDSRAAPATDFDPTGWELALVSTPCTAIASVNERELDGRLSSLNLNSLYDQGAYRSAKQTVFAVPAPNPFEVQDPFVLSSGNPPPPTVQIGAISQQHINPFAHHQPYQPLQMRPANPFEDAGYGAFPVYPVSHPLSNNPFGSTGTI 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01996 546 Gene3D ANTH domain 173 324 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Spst2g01996 546 SMART enth_2 30 161 IPR013809 -
Spst2g01996 546 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Spst2g01996 546 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Spst2g01996 546 CDD ANTH_N 32 154 - -
Spst2g01996 546 FunFam Clathrin assembly protein AP180 6 161 - -
Spst2g01996 546 FunFam Putative clathrin assembly protein 173 321 - -
Spst2g01996 546 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 494 IPR045192 GO:0048268|GO:0072583
Spst2g01996 546 Gene3D - 4 161 IPR008942 -
Spst2g01996 546 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Spst2g01996 546 SUPERFAMILY GAT-like domain 178 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01996 Spst-Chr2 18954543 18961758 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01996 - - gmx:100796656 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01996 2 18954543 18961758 Spst2g01996 2 18954543 18961758 ECH