Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01769 ATGGGTACTTCTGGCAACAATTTTCTCCAAGTAGTGTTCAAGAACTTCGATGTTCTTGCTCTGCCCTTGGTCACCCTGGTGTACCCTTTATATGCTTCAATAAAGGCCATAGAGAGTAGGTCCAGTGTTGATGATCAGCAATGGCTGACTTATTGGGTTCTCTATTCTTTGATTACTCTGTTCGAACTCACATTTGCCAAAGTTCTAGAAGTGCTTGCCATTTGGCCTTATGCCAAGTTGATACTTAGTTGCTGGCTGGTTCTTCCACAGTTCAATGGGGCAGCACATGTTTATAGGCACTATGTTAGACCATTCTATATGAATCCACAAATGCCACAAATGCCAAAATTCCCAGGAACTTCTCAAATGTGGTATGTTCCTCCAAAGAACATATTTAGTAAGCAGGATGATGTCCTCACTGCTGCTGAGAGATACATGGAAGAGCATGGAACAGAAGCATTTGAAAGACTCATAACCAAGGCTGACAGAGGAGGTAGAGCACAGAGGAGTGGAAATTATATGATGTTTGACGATGATTATATATATTAA 549 0.4135 MGTSGNNFLQVVFKNFDVLALPLVTLVYPLYASIKAIESRSSVDDQQWLTYWVLYSLITLFELTFAKVLEVLAIWPYAKLILSCWLVLPQFNGAAHVYRHYVRPFYMNPQMPQMPKFPGTSQMWYVPPKNIFSKQDDVLTAAERYMEEHGTEAFERLITKADRGGRAQRSGNYMMFDDDYIY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01769 182 PANTHER HVA22-LIKE PROTEINS 22 149 IPR004345 -
Spst2g01769 182 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01769 Spst-Chr2 16632619 16634671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01769 K17279 - gmx:100306464 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01769 2 16632619 16634671 Spst2g01769 2 16632619 16634671 ECH
Spst2g01769 2 16632619 16634671 Spst3g04686 3 98668721 98670095 PCT