Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01562 ATGGCGCAAGAACAGGACTTCAAAACAAGCATCTCACTTTCAAAGTATGACACCTATTTCGATACCATACAATCTAGAAAGATGCTACCGCAGTCATTGCAGGAAACCTTGACAGATGCATTTGCAAAGATTCCAGTCTCTTCTTTTCCAGCAGTTCCTAGCGGAAAAGTCATTGAAATTCTAGCAGACACGACGGTAGGAGAAGCAGTTAAGATTCTATCTGAAAGCAACATTTTAGCAGCACCAGTTAAAGAGCCAGACACAGTTACAAGTTCAGATTGGAGAGGCAAGTACCTTGGCATTATAGATTATTCAGCCATCATTCTCTGGGTGCTGGAGAGTGCAGAACTTGCAGCAGCTGCTCTATCAGCAGGTACAGCAACAGTTGCTGGAGTTGGTGCAGGAACCGTGGGTGCTTTGGGAGCACTAGCATTGGGAGTGACAGGCCCTGCTGCAATTGCTGGACTAACTGCTGCTGCAGCAGGTGCTGCCCTGGCAGGTGGCATTGCTGCAGAAAATATGATGGCTAAAGATGCACCTCAAGCTGCTGATAACCTGGGAGAAGACTTTTACAAAGTAATACTGGAAGAAGAACCCTTTAAGTCAACAACGGTGCGATCAATACTTAAATCATACCGATGGTCACCTTTTGTTCCAGTTGGAAGAGATAGCGCTATGTTGACTGTCTTGTTGCTTCTCTCAAAGTATAGGCTGAGGAATGTACCTGTGATAGAGTCAGATACACCTGAAATGGTAAACTTCATTACTCAGTCTGCAGTTGTCCAAGGTCTTGAGAGATGCAAAGGCAGAGATTGGTTTGATTGCATTGCAGAAAAGTGTATATCTGATCTGGGACTTCCTTTTATGTCTACATCTGAGGTTATTAGCATCCAGAGCAATGAATTGATTCTTGAAGCTTTCAAGCAAATGAGGGATAATCAAATTGGTGGTCTTCCTGTAGTAGAGGGGCCAAAGAAGAGAATTGTTGGAAACTTGAGCATACGAGACATCAGACACTTGCTGCTAAGGCCTGAGATTTTCACCAATTTTAGGAAGCTGACTGTGATGGATTTCATGAACGAAGTTGTCTCTTCATCCTTGGAAACTGGAAACTTTGGCCAGCCTATAACATGCAAGCTAGACTCGACAATGCAGGCTGTGATCCATTCTCTTGCTTCTCAGTCTATTCACAGGATTCATGTGGTAGATGGACAGGATGAAGTAGTTGGAGTCATTACACTGAGAGATGTTATCTCTTGTTTTGTAACTGAACCTCCTTACCATTTTGATGATTACTATGGATTTGCAGTGAAGGAGATGATGAGTCAATAA 1332 0.4332 MAQEQDFKTSISLSKYDTYFDTIQSRKMLPQSLQETLTDAFAKIPVSSFPAVPSGKVIEILADTTVGEAVKILSESNILAAPVKEPDTVTSSDWRGKYLGIIDYSAIILWVLESAELAAAALSAGTATVAGVGAGTVGALGALALGVTGPAAIAGLTAAAAGAALAGGIAAENMMAKDAPQAADNLGEDFYKVILEEEPFKSTTVRSILKSYRWSPFVPVGRDSAMLTVLLLLSKYRLRNVPVIESDTPEMVNFITQSAVVQGLERCKGRDWFDCIAEKCISDLGLPFMSTSEVISIQSNELILEAFKQMRDNQIGGLPVVEGPKKRIVGNLSIRDIRHLLLRPEIFTNFRKLTVMDFMNEVVSSSLETGNFGQPITCKLDSTMQAVIHSLASQSIHRIHVVDGQDEVVGVITLRDVISCFVTEPPYHFDDYYGFAVKEMMSQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01562 443 Pfam CBS domain 374 419 IPR000644 -
Spst2g01562 443 Pfam CBS domain 290 342 IPR000644 -
Spst2g01562 443 ProSiteProfiles CBS domain profile. 289 348 IPR000644 -
Spst2g01562 443 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
Spst2g01562 443 ProSiteProfiles CBS domain profile. 367 431 IPR000644 -
Spst2g01562 443 SUPERFAMILY CBS-domain pair 275 430 IPR046342 -
Spst2g01562 443 SUPERFAMILY CBS-domain pair 36 263 IPR046342 -
Spst2g01562 443 Gene3D - 34 268 IPR046342 -
Spst2g01562 443 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 50 422 - -
Spst2g01562 443 CDD CBS_pair_SF 291 418 - -
Spst2g01562 443 SMART cbs_1 374 422 IPR000644 -
Spst2g01562 443 SMART cbs_1 56 112 IPR000644 -
Spst2g01562 443 SMART cbs_1 293 342 IPR000644 -
Spst2g01562 443 SMART cbs_1 216 265 IPR000644 -
Spst2g01562 443 Gene3D - 276 424 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01562 Spst-Chr2 14321204 14323500 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01562 - - gmx:100800376 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01562 2 14321204 14323500 Spst2g01562 2 14321204 14323500 ECH