Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01553 ATGTCTACCGTTGCATTAGAACCTCTCTTACACCTTTGCACCAGAAAACCTTCATTTCATACCCAAACACCAATCCTCCTGAGACCCTTCTTTCTTCCCACGCGCTCCTCCAATCTCAATGATGCATCCTTCATCTTCTGCCAACCTCGGAGGACTCTCTCTCCAGTGCCTGCGGCTTCCCTTACAGACACACCTACCCTTCAATGCCCTCAGACCACCACCAACACTTTTGCATTCAACCGAACCCAAATGGTGACGGGAAAGATTTTTGTGAGATTAGATCGTGGAAAGGATATGAAGGATTGGGAGCTTATGGTGGGGTGCAGTCTACCCGGAAAATGGGTTCTTCACTGGGGAGTTACCTTTCTTGGTGATGCTGGAAGGGAATGGGATCAACCTCCTCATGATATGATACCCCCTGGATCAGTTCCTGTAAAGGATTATGCAGTAGAGACCCCTTTTAAGAAGTCATCCTTATATGCAGAAGGAGATACGCTTCATGAAGTCAGGATTGATATAAGAGCCAAAAATGGAATTTCAGCAATTCATTTTGTTCTCAAGGATAAGGAAGCTGGAGCTTGGTACAAAAACGAAACAAGAGATTTCGTGGTTTCTTTGGTGAACTACCTTTACGCGGATTCGGATGCTAGTAAAATTGAACCTAAAAGAGGCTTTGTTTTTTGGCCAGGGAATTTGTGGCAAATATATAACATGTTCCCCAAATCAAAAGCTGGCGAAAATGAAAGCAGTGAATACAGAGTTTCAGAGCGAGAAAACAATCAACCCAAAGGTTTCTATGAGGAAGTGTATGTAACAAAGAAGGTTTTAGTTAATAACTCTATCAGTGTCTCCACCAAGAAATGCTTTGAATCTGGGTCAGTTAAGGACCTTTTATATTTTGAAACTGATCTACCTGGAGATGTTGTCATTCACTGGGGAGTTTGTACAGATGCTTCAAGAAGATGGGAAATCCCACCTCCTCCTTATCCACCAGGCACAGTAGCATTTAAAGACAAGGCTTTGAGAACTCAATTACGGGGTATAGAGCCAAGAGACGGTGGAAAAGTATATTCAGCAGAAATCGCTATAGAAGAAGGATTTACAGGATTTGTTTTTGTTCTTAAGCAAAATGAAAATTGGTTCAAGTACTTGGGAAATGACTTTTATGTTCCCCTTTCAATTTCTGGAAGCTTGCCTAGTACTGGCAACAAAGAGGATCTGAAAGAAGGTCTGCAGATTGAAGAGCCTAGTCAAGAGAATTATTTGTTTGCATTCACTGATACAATAGCCAATGAAATAAAAAATATAGTCAAAGGCAATTTCTATGAGAAGAATCAAAAGATAAAATCTAAAAAGGCGCAACAAAGCATTTTTGAAGAAATAGAAAGACTGGCTGCTGAAGCCTATAATATATTCAGAATCTCCATTCCAACTTTCTTTGAGCCAACTACTGCAAAACCTGAAGCAACGATTGTGGTGGAACCTGAGACAACTATTATGGTACCAGAGGCTTCAGTGGAATCAGAGACAATTTCCCTGGATCCAAAAATATGCTCAGGGACAGGCACAGGGTATGAAATATTATGCCAAGGGTTTAACTGGGAATCTCATCGATGTGGAAGATGGTACAAGGAGCTTAAAGAGATAGCTTCAGAATTAGCATCAATCGGTTTCACTGTGGTCTGGTTACCGCCACCTACAGAGTCTGTTTCACCTGAAGGATACATGCCAAAGGATTTATATAATTTAAATTCCAGATATGGAAACATAGATGAACTCAAAGATTTGGTGAAAAGTTTTCATGAAGTTGGGATCAAAGCTCTAGGAGATGCCGTTTTAAATCACCGCTGTGCTCATTATCAGAATCGAAATGGAGTTTGGAATGTATTTGGTGGCTGTCTCGACTGGGATGATCGTGCTATTGTTTCTGATGATCCACATTTTCAGGGTAGGGGCAACAAGAGTAGCGGAGATAATTTTCACGCTGCTCCAAACATTGATCATTCACAGGAGTTTGTGAGAAAAGATCTCAAAGAATGGTTATGCTGGTTGAGATGGTTATGCTGGAGAGCTAAGTACAGGATGCCAGTCCCTACTTTGAAAGAAATTGGATATGATGGATGGAGGCTAGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATAGAGGCAAGTGAACCTTATTTTTCTGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATGGTGAAACTGATCATAATCAAGATGCTCATAGGCAGAGGATAGTTGACTGGATCAATGCCACTAATGGTACCTCTGGTGCATTTGATGTTACAACAAAAGGGATTCTTCACACTGCACTGGAAAAATGTGAATATGAGCGATTGTCAGATGAGAAGGGAAAGCCTCCAGGTGTAATTGGGTGGTGGCCTTCTCGTGCTGTTACCTTTATAGAGAATCATGACACTGGCTCCACTCAGGGTCATTGGAGATTTCCCAGTGGAAAAGAAATGCAAGGATATGCTTACATTCTTACTCACCCGGGAACTCCATCAGTGTTTTATGACCACATTTTCTCTCACTACAAGGCTGAAATTACAAGTCTAATATCTCTCAGGAAGAGGAACAAGATCCACTGCAGGAGTACAGTTCAAATTAGCAAAGCAGAAAAGGATGTTTATGCAGCCATCATTGATGAAAAAGTTGCTATGAAGATCGGACCAGGACGTTTTGAACCACCAAGTGGCTCCCAGAAATGGTCATTAGCTATTGAGGGAAAAGACTATAAGATTTGGGAAGCATTATTACCATAA 2805 0.4132 MSTVALEPLLHLCTRKPSFHTQTPILLRPFFLPTRSSNLNDASFIFCQPRRTLSPVPAASLTDTPTLQCPQTTTNTFAFNRTQMVTGKIFVRLDRGKDMKDWELMVGCSLPGKWVLHWGVTFLGDAGREWDQPPHDMIPPGSVPVKDYAVETPFKKSSLYAEGDTLHEVRIDIRAKNGISAIHFVLKDKEAGAWYKNETRDFVVSLVNYLYADSDASKIEPKRGFVFWPGNLWQIYNMFPKSKAGENESSEYRVSERENNQPKGFYEEVYVTKKVLVNNSISVSTKKCFESGSVKDLLYFETDLPGDVVIHWGVCTDASRRWEIPPPPYPPGTVAFKDKALRTQLRGIEPRDGGKVYSAEIAIEEGFTGFVFVLKQNENWFKYLGNDFYVPLSISGSLPSTGNKEDLKEGLQIEEPSQENYLFAFTDTIANEIKNIVKGNFYEKNQKIKSKKAQQSIFEEIERLAAEAYNIFRISIPTFFEPTTAKPEATIVVEPETTIMVPEASVESETISLDPKICSGTGTGYEILCQGFNWESHRCGRWYKELKEIASELASIGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDLVKSFHEVGIKALGDAVLNHRCAHYQNRNGVWNVFGGCLDWDDRAIVSDDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLCWLRWLCWRAKYRMPVPTLKEIGYDGWRLDFVRGFWGGYVKDYIEASEPYFSVGEYWDSLSYTYGETDHNQDAHRQRIVDWINATNGTSGAFDVTTKGILHTALEKCEYERLSDEKGKPPGVIGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPSVFYDHIFSHYKAEITSLISLRKRNKIHCRSTVQISKAEKDVYAAIIDEKVAMKIGPGRFEPPSGSQKWSLAIEGKDYKIWEALLP 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01553 934 Gene3D - 875 931 IPR013780 -
Spst2g01553 934 SUPERFAMILY (Trans)glycosidases 525 858 IPR017853 -
Spst2g01553 934 PANTHER ALPHA-AMYLASE 516 932 - -
Spst2g01553 934 SUPERFAMILY Glycosyl hydrolase domain 875 930 - -
Spst2g01553 934 SMART aamy 526 870 IPR006047 GO:0005975
Spst2g01553 934 CDD AmyAc_arch_bac_plant_AmyA 527 881 - -
Spst2g01553 934 Gene3D Glycosidases 526 874 - -
Spst2g01553 934 SMART alpha-amyl_c2 871 931 IPR012850 GO:0004556|GO:0005509|GO:0005975
Spst2g01553 934 Pfam Alpha amylase, catalytic domain 553 851 IPR006047 GO:0005975
Spst2g01553 934 Pfam Alpha-amylase C-terminal beta-sheet domain 872 930 IPR012850 GO:0004556|GO:0005509|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01553 Spst-Chr2 14245384 14252500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01553 1 930 Glycoside Hydrolase AT1G69830 57.294 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01553 K01176 - gmx:100810333 1432.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01553 2 14245384 14252500 Spst2g01553 2 14245384 14252500 ECH