Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01516 ATGAAGAGGGGTAGTAAACTAGACTCGTTTGTGCTACCCAACAGGCTCACACTGCTTCAGATTTTCATGCTGGTGATGCTCTTTTACTTGCTCTTCATGAGCTTCGAAATCCCTCTGGCTTTCAGAGCCGGGTTCGGTTCCGAAAACGGCGCCGTTTTCCTCACGGACTCATTGCCCATGCCCATGCCGCTCTTGCTTGAAGAACCGAACCATGGGGTACAAATTCGCGAACCCAGAGGGTTAAAGTTGGAGAAAGTTTCCTCCTTGAAGTTCAACGGAATCTTCTCGGAGGGTTCAGAGCTGCACAAGGTGGCGCGGCATGCGTGGGTTGCTGGGGAGAAACTCTGGGGGGACGTGGAGAGTGGGAAAGTGAAGAGCTTTGCGAAGGGGAAGGCTGAAAACGGGTCGGACTCGTGCCCGAATTCGGTTTCAGTTTCCGGGGCTTCGTTTCGGGCGAAAGGGGTAATGGTGCTGCCATGCGGACTGACGCTGTGGTCGCATGTGACGGTGGTGGGGACGCCGCGTTGGGCGCACGCGGAGAGGGACCCTAAGATAGCGGTGGTGAGGGACGGCGATGAGGCGGTGATGGTGTCTCAGTTCATGATGGAGTTGCAGGGGTTGAAGGCTGTGGACAAAGAGGAACCGCCGCGGATTCTGCATTTCAATCCGAGGTTGAGAGGGGATTGGAGTGGGAAGCCTGTGATTGAGCAGAACACTTGCTATAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGGTGGAAGTCTCGTGCGGATGAGGAAACTGTTGATGGACATGTAAAATGTGAAAAGTGGATTCGCGATGACAATAATCATTCTGAAGAGTGGAAGGCAACATGGTGGTTGAACAGACTGATAGGACGAAAAAAGAAGGTGACAATTGATTGGCCATATCCTTTTGCAGAGGGTAAGTTATTTGTTCTCACCATAAGTGCCGGCTTGGAAGGTTACCATGTTAGTGTGGATGGAAGGCATGTGACATCCTTTCCCTATCGCACGGGATTTGCTCTTGAGGATGCTACTGGACTATCCATAAATGGGGATGTTGATGTGCACTCTATATTTGCGGCTTCCTTGCCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAGTGGAAAGCTCCTCCTCTTCACAATGTGAATGTGGATCTCTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCTGAACGGATGGCTGTGAGGAAGTCCTGGATGCAGCATAAGTTAATCAAATCTTCACATGCCGTGGCTCGATTTTTTGTTGCATTGCATGCAAGGAAGGACATAAATGTGGACATAAAGAAAGAAGCTGAGTATTTTGGTGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCACACAGTAGCTGCTAAGTATATCATGAAGTGTGATGATGACACATTTGTCAGAGTGGAATCTATTGTAAATGAAGCAAGACAAGCTCAAAGTGATAAAAGTCTCTACATGGGAAATATGAATTACCACCATAGGCCTCTTCGCTATGGGAAATGGGCTGTAACTTACGAGGAATGGGTAGAGGAAGAATATCCTATCTATGCCAATGGCCCAGGTTACATAATCTCGGCTGACATTGCGCAGTTCATTGTATCTGAATTCGAGAAGCGTAAATTAAAACTATTTAAAATGGAGGACGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGCACAAGAGCAGTGGAGTATGTGCACAACTTGAAGTTCTGCCAATTTGGTTGCATTGAAGAGTACTACACTGCACATTACCAATCACCAAGACAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAACCACTCTGTTGCAACATGAGATGA 1932 0.4746 MKRGSKLDSFVLPNRLTLLQIFMLVMLFYLLFMSFEIPLAFRAGFGSENGAVFLTDSLPMPMPLLLEEPNHGVQIREPRGLKLEKVSSLKFNGIFSEGSELHKVARHAWVAGEKLWGDVESGKVKSFAKGKAENGSDSCPNSVSVSGASFRAKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVRDGDEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGHVKCEKWIRDDNNHSEEWKATWWLNRLIGRKKKVTIDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPPLHNVNVDLFIGILSAGNHFAERMAVRKSWMQHKLIKSSHAVARFFVALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIHTVAAKYIMKCDDDTFVRVESIVNEARQAQSDKSLYMGNMNYHHRPLRYGKWAVTYEEWVEEEYPIYANGPGYIISADIAQFIVSEFEKRKLKLFKMEDVSMGMWVEQFNSTRAVEYVHNLKFCQFGCIEEYYTAHYQSPRQMTCMWEKLQHQGKPLCCNMR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01516 643 FunFam Hydroxyproline O-galactosyltransferase GALT4 153 271 - -
Spst2g01516 643 Pfam Galactosyltransferase 410 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst2g01516 643 Gene3D - 387 636 - -
Spst2g01516 643 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
Spst2g01516 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 156 362 IPR013320 -
Spst2g01516 643 Gene3D - 192 362 - -
Spst2g01516 643 FunFam Hydroxyproline O-galactosyltransferase 388 631 - -
Spst2g01516 643 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
Spst2g01516 643 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 332 592 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst2g01516 643 Pfam Galactoside-binding lectin 155 362 IPR001079 GO:0030246
Spst2g01516 643 CDD GLECT 158 362 IPR001079 GO:0030246
Spst2g01516 643 FunFam Hydroxyproline O-galactosyltransferase GALT2 278 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01516 Spst-Chr2 13897246 13901668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01516 6 643 Glycosyltransferase AT1G74800 59.731 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01516 K20843 - gmx:100803219 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01516 2 13897246 13901668 Spst2g01516 2 13897246 13901668 ECH
Spst2g01516 2 13897246 13901668 Spst2g01516 2 13897246 13901668 PCT