Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01515 ATGAAAGATGAAAATGATTTTGGATTGAGTGGGAAAGGTTATGAGTTGATGATGGAAGAGAGTTTGAAGAATGACATGAACAAGAGGTGGCGTGGGTCGTGGTCGCACGATGGGTTAATTTCCTGCACTTTCATTTCTGAATCCTCCATCGGCAATTCGATTCAACCTTCTGCGGCGGCGTCGTTTCTTGCTTTCGCAATTGCATGCATACTACGTAGACCAACACAACAACAACAACTTACAATGGATCTATTCATGACTCCGAGGGGATCTGTGTCATCCAGCATTGGAGACGCTGCAGAACTTGAGGCCAATCTCACACTCAGTGATAGGCTCAAGGTTTTCAAAAGCTCCTCTTTTGATCCCAATGCCTATGTCGCCTCCAAATCCCGCACCATGAACGAAAAGGAGATAAGACACTTGTGCGCTTATCTTCTTGACCTGAAGAAGGCTTCGGCAGAAGAAATGCGTAAAAGTGTTCTTGCTAACTACTCAGCCTTCATACGTACATCCAAAGAGATATCTGATCTTGAGGGAGAGTTGCTTTCCATGAGAAATCTTCTATCCAACCAGGCTGCTTTGGTTCATGGTTTAGCAGATGGGTGCGAGCTTAGTCCCATGATTAGTGGAAATGAAGACTCAGACATGGATAATATACTAGATGAAAAAACAGAAATATCCAAGACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAAGTTCTATTAGCGGAGAAAAGAGTGGATGAAGCTATGGCTGCTTTGGAAGAAGGAGAAAAAATGGTAAAAGAAATTAGTGAAGGGGGAACTTTAAGTTCGAGTTTATTTGAGGCATTGCAAGCTGCTATTGCTGAACACAGACAAAAACTAGCTGATCAACTAGCAGACGCTATCTGCCAGCCATCAACTCGCAGTTCAGAGATTCGATCAACAGCATTGTCATTGAAAAAACTTGGGGATGGTCCTCGTGCTCATACATTACTACTAAGTTCTCGCCAAGAAACAATGCACCGTGGCATTAAAAACCTTCAATCCAGCACTTATGGTGGAGTTGGGGCATTTACGGCTATCCTTTCACAGCTTGTCTTTTCCACCATTTCGCAGGCAGCATCAGATTCTTTGTCAGTATTTGCTGAAGAAGAACCTGCATATACGTCTGAGCTAGTAACTTGGGCAGTTGCACAGGCTGAGAAATTTGCTGCTCTCCTTAAGAAGTGCATTCTTGCTTCTACAGCTGCTGCAGGAGGTTTGAGAGTTGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGTTATCTGCTAGAGAATAAAAGTGGACTGGCCCTTTCCCCTGTCTTAATAAAATTTTTCAGACCCTTTGTTAAGCAAGCACTGAAAACAAATTTGAAAAGAATTGAACAAAGCAGTTCTGCTCTGGCTGCTGCAGATGATTGGGTACTTGCTTATACTCCAACCAGCAGCAGGCATTCTGGCCTACCTCCATCTTCTTCTCACATGAACATAGGTTCCTTCCAACCAAAGCTTTCAAGCAGTGCTGACAAATTCAACTCAATGGTTATGGAACTATTTGAAGATGTAGGGCCTCTTGAAATACTACAATTGGATGTTCAAGCAGTTGAAGGCCTTATACATGAGTTCAACTTCTATGTCAACTTACTAATAAATGCATTGCCAGGATCAGTGGTAACTGAGAACCTGGAAGGGCCTAGAATTGTTAAGGTTGCTGAGACTGAAGCACAGCAGATAGCATTACTAGCAAATGCAATACTGCTGGCAGATGAGCTGCTTCCACGTGCTGTTGTCAAGTTTTCACATAGCAGCAGAGGTGATGACTCTCAGAGAAAAGGATCAGACAAACAGCGTGAACTAAAGAAAAGGCTCCAACGTGAAGTTGATCGTCTGCGTGACAGCTTTTGCCGGCAACATGCTCTTGAACTTATCTTCACAGAAGAAGGAGAAGCGCGTCTAAACGCGTTAATATATTTGGGATTGGATGGTAACGTAGAACAGCCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGATTTTTGCTAAGCTTACCGAAGTGGCAAGCATTTCAGCCGACATATTTGTAGGAAGGGAAAGATTTGCTACTGTTTTATTGATGAGACTCGCGGAAACAGTGGTCCTGTGGCTTTCTGATGACCAAGCTTTCTGGGAAGAGGTTGAGGCAGGATCAACACCTTTGGGTCCCATAGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATCTGCATCAAGCTATTAAAAACATCATTGAAAGGGCTATTAATGCTCTTGCTGCTACAGGTCTAGATCCCAACAGTGTCTTGCCTGAGGATGAGTGGTTTGTTGAAGTTTCTGAAATAGCTATAAAGATGTTAACAGGGAGAGCTGCCTTTGATAGTGTAGAGGAAGATATTCCTAGCCCCACTTCATCTGTTCAAATGTAG 2496 0.4287 MKDENDFGLSGKGYELMMEESLKNDMNKRWRGSWSHDGLISCTFISESSIGNSIQPSAAASFLAFAIACILRRPTQQQQLTMDLFMTPRGSVSSSIGDAAELEANLTLSDRLKVFKSSSFDPNAYVASKSRTMNEKEIRHLCAYLLDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSNQAALVHGLADGCELSPMISGNEDSDMDNILDEKTEISKTEKWLIGYLETLEVLLAEKRVDEAMAALEEGEKMVKEISEGGTLSSSLFEALQAAIAEHRQKLADQLADAICQPSTRSSEIRSTALSLKKLGDGPRAHTLLLSSRQETMHRGIKNLQSSTYGGVGAFTAILSQLVFSTISQAASDSLSVFAEEEPAYTSELVTWAVAQAEKFAALLKKCILASTAAAGGLRVASECVHVCMSHCYLLENKSGLALSPVLIKFFRPFVKQALKTNLKRIEQSSSALAAADDWVLAYTPTSSRHSGLPPSSSHMNIGSFQPKLSSSADKFNSMVMELFEDVGPLEILQLDVQAVEGLIHEFNFYVNLLINALPGSVVTENLEGPRIVKVAETEAQQIALLANAILLADELLPRAVVKFSHSSRGDDSQRKGSDKQRELKKRLQREVDRLRDSFCRQHALELIFTEEGEARLNALIYLGLDGNVEQPEWFPSPIFQEIFAKLTEVASISADIFVGRERFATVLLMRLAETVVLWLSDDQAFWEEVEAGSTPLGPIGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIERAINALAATGLDPNSVLPEDEWFVEVSEIAIKMLTGRAAFDSVEEDIPSPTSSVQM 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01515 831 Coils Coil 618 638 - -
Spst2g01515 831 Gene3D - 352 457 IPR042560 -
Spst2g01515 831 Pfam Exocyst component 84 C-terminal 231 437 IPR032403 -
Spst2g01515 831 SUPERFAMILY Cullin repeat-like 223 459 IPR016159 -
Spst2g01515 831 Coils Coil 277 297 - -
Spst2g01515 831 Gene3D - 221 344 IPR042561 -
Spst2g01515 831 Pfam Vps51/Vps67 115 192 - -
Spst2g01515 831 PANTHER EXOCYST COMPLEX COMPONENT 8 91 830 IPR033961 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01515 Spst-Chr2 13886483 13896022 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01515 K19986 - gmx:100818886 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01515 2 13886483 13896022 Spst2g01515 2 13886483 13896022 ECH