Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01495 ATGAGAACCCATTTTCCTTTACTTTTCTTCACCCTATCCCTTCTATTGGGCCAATCCAGACCCGACCCTGACCCACTTCAAGATTACTGTGTTGCTGATAACAAAGGTGAATTTTTCATTAATGGGGTGCCTTGTATCAACCCAGACAAAGTTTCCCCGTCGCACTTTGTAACATCTGCTTTGTCTAAGAGTGGTAACACTAGTAACCAATTCGGCTTCAGTGTCACAGCCACCAATACTGTTAATCTTCCTGGGCTTAACACACTGGGCCTGGTACTAGCCCGGGTTGATATCGCTGGCAATGGGATCGTGCCACCTCACTCGCATCCACGGGCCTCAGAAGTTACCACTTGTCTCAAGGGACAGCTTCTTGTGGGCTTTGTTGACACAAGTAACCGTGTGTTTACCCAGAACCTGAAGCCCGGTGAGTCATTTGTGTTCCCAAAGGGCCTGGTTCATTTCTTGTTCAATCGTGACTCAAGGGAACCAGCACTAGCCCTTTCTGGTCTAAATAGCCAGAACCCAGGTTCACAAATTGTATCACTTGCAACATTCGCTAGCAAGCCTCCTATAATTGATGAAATTCTTAAGAAGGCTTTCCAAATTACGGGCAGAGAAGTGGAAACTATTCGCAGAAACCTTGAATGA 648 0.463 MRTHFPLLFFTLSLLLGQSRPDPDPLQDYCVADNKGEFFINGVPCINPDKVSPSHFVTSALSKSGNTSNQFGFSVTATNTVNLPGLNTLGLVLARVDIAGNGIVPPHSHPRASEVTTCLKGQLLVGFVDTSNRVFTQNLKPGESFVFPKGLVHFLFNRDSREPALALSGLNSQNPGSQIVSLATFASKPPIIDEILKKAFQITGREVETIRRNLE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01495 215 CDD cupin_OxOx 22 214 IPR001929 GO:0030145
Spst2g01495 215 Gene3D Jelly Rolls 21 215 IPR014710 -
Spst2g01495 215 Pfam Cupin 61 207 IPR006045 -
Spst2g01495 215 FunFam germin-like protein subfamily 2 member 1 21 215 - -
Spst2g01495 215 SMART Cupin_1_3 59 208 IPR006045 -
Spst2g01495 215 PRINTS Germin signature 107 127 IPR001929 GO:0030145
Spst2g01495 215 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Spst2g01495 215 PRINTS Germin signature 137 157 IPR001929 GO:0030145
Spst2g01495 215 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 19 209 - -
Spst2g01495 215 SUPERFAMILY RmlC-like cupins 22 213 IPR011051 -
Spst2g01495 215 ProSitePatterns Germin family signature. 102 115 IPR019780 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01495 Spst-Chr2 13695899 13696546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01495 22 211 Miscellaneous Gene Families AT5G39130 44.845 5.62e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01495 - - gmx:100500154 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01495 2 13695899 13696546 Spst2g01495 2 13695899 13696546 ECH