Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01483 ATGTCCGATCCTTCGAGGGGTCGCGTTACCATCACTCTAGGGCGTAGCGGTCAGGTTGTGAAGAGGGATGTATCTTCTGTAGATGTTTCTTCTTTCTCTTCTCTTCCTTCAGCTGGCACTAAGCGGTCTGTGAGAGACAGGATTGGAAATAATGCAGATAGTTCTGTGTGGCACGGAAATGGACTTGGCGGCAATAAACGACAGCGAGGAGATGTAAGAATGCAAAATGGACTGGATGGCAATGATCTTCGGTTGAAGCTCATGCAAAAAAGTGCATCTAGGCATTCTGACAGCAATGGTAGCAAGAGGCATATGGATCTCCGTGAAAAACTTTCAAAGGCAACTCACCCTCTAACAAATAATTTTAATTCTAAGCAGCACATGCCAGAATCACGGGAAACAAGTTTGTTGAGGCACATTCCCTCAGCTAGAAGTTCTGATGATTTAATGCGCATGGAATCCATGAGAAGCTCGTACTCTCCTTGGACATTGGATCATATTAGGAGAAGATCGCCAGATGGGTTTCCTAGTACATCCAGGGGTATTTCCCCTCAAAGGGATGCCCAAGACCTACAGAGAAGGCCGTTAAACAGGACATATGATGGTGTCAGATCTGTTCCATATGTAAGTAGGGATGTTCTTGAAACTTCGAGGCCTCCAGTGAGTACACCTCAATCTTTCATGTCACGCTCCGCAATGTCCACATTGCCTCCAGTAACTGCCAAGCCTGTAACATCTCATCCTGGCCAACTTCCTCCATCGAGCAGTGTTGCACAAAGGTCTTCGTATGTGGGTGATGAACAAGTACAACAATCAAACCAAACTGTGGATGGCCTGCTACATGCACTAGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCGTTGAAGCAAATGGGAGAAAATGACCTCAAAGAAATAGGGATTCCTATGGGTCCAAGGAAAAAAATTCTTCTCGCTCTCTTGCCTCGTACCAAGCGTCAACAGTGA 1008 0.4563 MSDPSRGRVTITLGRSGQVVKRDVSSVDVSSFSSLPSAGTKRSVRDRIGNNADSSVWHGNGLGGNKRQRGDVRMQNGLDGNDLRLKLMQKSASRHSDSNGSKRHMDLREKLSKATHPLTNNFNSKQHMPESRETSLLRHIPSARSSDDLMRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDAQDLQRRPLNRTYDGVRSVPYVSRDVLETSRPPVSTPQSFMSRSAMSTLPPVTAKPVTSHPGQLPPSSSVAQRSSYVGDEQVQQSNQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKEIGIPMGPRKKILLALLPRTKRQQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01483 335 PANTHER SCP160 91 331 - -
Spst2g01483 335 Pfam SAM domain (Sterile alpha motif) 271 327 IPR001660 GO:0005515
Spst2g01483 335 SUPERFAMILY SAM/Pointed domain 272 327 IPR013761 -
Spst2g01483 335 MobiDBLite consensus disorder prediction 22 70 - -
Spst2g01483 335 MobiDBLite consensus disorder prediction 241 260 - -
Spst2g01483 335 MobiDBLite consensus disorder prediction 170 194 - -
Spst2g01483 335 MobiDBLite consensus disorder prediction 23 40 - -
Spst2g01483 335 MobiDBLite consensus disorder prediction 215 235 - -
Spst2g01483 335 FunFam DDHD domain-containing 2 274 335 - -
Spst2g01483 335 ProSiteProfiles SAM domain profile. 271 334 IPR001660 GO:0005515
Spst2g01483 335 MobiDBLite consensus disorder prediction 216 235 - -
Spst2g01483 335 MobiDBLite consensus disorder prediction 117 151 - -
Spst2g01483 335 SMART SAM_4 268 333 IPR001660 GO:0005515
Spst2g01483 335 Gene3D - 273 335 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01483 Spst-Chr2 13521062 13528614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01483 261 327 Glycosyltransferase AT3G07170 55.224 1.65e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01483 - - gmx:100797199 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01483 2 13521062 13528614 Spst2g01483 2 13521062 13528614 ECH