Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01421 ATGGCAGATTCTAAACCAGGATTGAGGAAGCCTGTGTTCACCAAGGTCGAACAGCTTCGCCCAGGAACTAGTGGGCATACTTTAACTGTGAAGGTGGTCAGTGCTAAGATGGTGATGCAGAAAGGTCGTTCTGATGGTCCTCAATCCCGTCAAATGCGAATTGCGGAATGTTTGGTTGGCGATGAGACTGGAATGATAATATTTACTGCCAGAAATGAACAAGTGGATTTGATGAAAGACGGCGCTACTGTGACCCTGCGTAATGCCAAAATTGACATGTTTAAAGGATCAATGCGACTTGCTGTGGACAAGTGGGGCCGTGTTGAAGTCACGGAAGCTGCTAGTTTCACTGTGAAGGAAGATAATAACTTGTCTCTCATTGAGTACGAATTGGTGAATGTTGTTGTGGAATAA 414 0.4493 MADSKPGLRKPVFTKVEQLRPGTSGHTLTVKVVSAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNEQVDLMKDGATVTLRNAKIDMFKGSMRLAVDKWGRVEVTEAASFTVKEDNNLSLIEYELVNVVVE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01421 137 CDD SoSSB_OBF 27 110 - -
Spst2g01421 137 PANTHER OS05G0244600 PROTEIN 3 134 - -
Spst2g01421 137 FunFam Uncharacterized protein At4g28440 23 126 - -
Spst2g01421 137 SUPERFAMILY Nucleic acid-binding proteins 7 135 IPR012340 -
Spst2g01421 137 Gene3D - 23 126 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01421 Spst-Chr2 12923445 12926993 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01421 - - gmx:100526985 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01421 2 12923445 12926993 Spst2g01421 2 12923445 12926993 ECH