Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01419 ATGTACAAACGGTCTAATAAAGAACATGAAGCAGGTAATAAGAAGATTAGAAACTGTGACGCGGCAGAAAGCAGTTTTCAAAGAATGAGTGTTGTTGATGAGGATCCGTCAGGGACTTCATCATTTCAATTAGGAAATTTGAGTCGGTGCTCATTGGTTTGTAAACCAGCTGCTGTTAAGACAGCCAACAGATTCATCATGCTTCATAAAGTAACTCAGTCCTGGCCTTCCCCTGCCTTGTCTTTTGTGGAGACAATGCCTCAAGATGCACAAAGTTCTCACGTTACAGCTTTTAATTCAGGTGATGGGTCCTCAAAATCAGATAATGAGTCAACCTCGTCTAAGAGCATAAGGGATGTTCACATTTCAATGCGGTTAATGGAGGACTTTCTAGATCTTGCTAAAGAAAATACAGAAAAGGATATGGAAACTTGTGGTATACTTGGTGCCTATCTTGAGAAGGGAACCCTCTACATGACTACTCTGATCATACCAAAGCAGGAATCCGCTTCCAATTCTTGTCAAGCTACGAATGAGGAGGAAGTGTTCAAAATCCTAAATGAAAGATCACTTTATCCTGTGGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCTGTGGATCTGCACACTCAATATTCCTACCAGATGATGATTCCTGAGGCATTTGCCATTGTCTTGGCACCAACTGATAACTTAAGGAGCTGCGGATTATTTCGCCTGACTGAACCTGAAGGAATGAATATTCTGAAAAATTGTCAGGAGACAGGATTTCATCCACACAAAGAACCAGATAATGGCAACCCTGTGTATGAGCACTGCTCGAATGTGTATAGAAACACTAATCTAAGGTTTGAAATCTTTGATTTACGCTAA 885 0.4068 MYKRSNKEHEAGNKKIRNCDAAESSFQRMSVVDEDPSGTSSFQLGNLSRCSLVCKPAAVKTANRFIMLHKVTQSWPSPALSFVETMPQDAQSSHVTAFNSGDGSSKSDNESTSSKSIRDVHISMRLMEDFLDLAKENTEKDMETCGILGAYLEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPTDNLRSCGLFRLTEPEGMNILKNCQETGFHPHKEPDNGNPVYEHCSNVYRNTNLRFEIFDLR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01419 294 PANTHER AMSH-LIKE PROTEASE 45 294 - -
Spst2g01419 294 FunFam AMSH-like ubiquitin thioesterase 2 100 294 - -
Spst2g01419 294 SMART pad1_6 119 247 IPR000555 GO:0005515|GO:0008233|GO:0008237
Spst2g01419 294 MobiDBLite consensus disorder prediction 93 116 - -
Spst2g01419 294 ProSiteProfiles MPN domain profile. 120 250 IPR037518 -
Spst2g01419 294 CDD MPN_AMSH_like 117 294 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Spst2g01419 294 Gene3D Cytidine Deaminase, domain 2 98 294 - -
Spst2g01419 294 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 116 224 IPR000555 GO:0005515|GO:0008233|GO:0008237
Spst2g01419 294 SUPERFAMILY JAB1/MPN domain 120 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01419 Spst-Chr2 12906332 12910379 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01419 K11866 - gmx:100807282 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01419 2 12906332 12910379 Spst2g01419 2 12906332 12910379 ECH