Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01402 ATGCATGGATCAGAAGTTTTGATACTCAATTCCTATTCGACACTTGACACGCCAGATCCGCAAATCGGAAAATTCAGAGCGCCGTCGAAAACCGCCGTCTGCGGCGGTAAAACTCGTCTCTGCATCCTCTTTGACGAGAATCCGGAGCCTCACGGGGCTTCTCTCTCTTCGAACATCGAACGTAACATTGAAACCAAACGCCAAAAACTCGAGTTCGCTATGGAAGAGTTGGAGCAGTGGAAGGAACAACTTTCTCACTTGTCGCATCTGGCCATGGATCATCTTCGCGAGGTTCCACCGAATCAGCTCTACGCTGCTGCTGCCATCGTGATGTTTACAACGCTGCTTCTTCTCTTGATACGGTTGTTGAAGCGCTCAAAGTCAAACACCATTGTGTTGACCGGGCTCAGTGGGAGCGGAAAAACTGTTATTTTCTATCAGCTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAGCCTAACGAAGGCACTTTTATTCTTAACAATGAGAAAACAAGGAAGGGCAAGATAAAACCTGTTCATATTGTTGATGTTCCTGGCCATTCTCGGCTTCGACCCAAACTGGACGAGTACTTGCCTCAAGCAGCTGGGATAGTTTTTGTGGTTGACGCTTTGGACTTTTTACCAAACTGTCGAGCTGCTTCAGAGTACCTATATGATCTATTGACAAAAGGAAGTGTTGTGAGGAAGAAGATTCCAGTGCTTATTCTCTGCAACAAAACAGACAAAGTGACTGCTCATACGAAAGAGTTTATCCGGAGACAGATGGAGAAGGAAATAGACAAATTACGGGCATCAAGAAGTGCGATATCAGATGCTGACATTGCAAATGAGTTCACCCTGGGGATACCGGGTGAGACATTTTCTTTTACCCAGTGCTCTAACAAAGTAACAACTGCCGATGCCTCTGGTTTAACTGGGGAAATATCTCAGCTGGAAGAGTTTATCAGGGAACATAGGCTTAAAAGAGAAAGGGGTTTTGGGGTGGGGATTGGGGTGTTTGGAGTAGGAATCAATGAAGATTTTCTTCAGTGTAAGTTCTGTGAACTGTTCACACTGACAGAGAATATAGTAGAAGGCTTATCTCGGATGGAAGCTATCATAAACATAGTTAGAGCAGAGAAGCTTCATGAATTCAATTTGAAGTAG 1179 0.4478 MHGSEVLILNSYSTLDTPDPQIGKFRAPSKTAVCGGKTRLCILFDENPEPHGASLSSNIERNIETKRQKLEFAMEELEQWKEQLSHLSHLAMDHLREVPPNQLYAAAAIVMFTTLLLLLIRLLKRSKSNTIVLTGLSGSGKTVIFYQLRDGSTHQGTVTSMEPNEGTFILNNEKTRKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPVLILCNKTDKVTAHTKEFIRRQMEKEIDKLRASRSAISDADIANEFTLGIPGETFSFTQCSNKVTTADASGLTGEISQLEEFIREHRLKRERGFGVGIGVFGVGINEDFLQCKFCELFTLTENIVEGLSRMEAIINIVRAEKLHEFNLK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01402 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 278 IPR027417 -
Spst2g01402 392 Gene3D - 122 329 IPR027417 -
Spst2g01402 392 Pfam Signal recognition particle receptor beta subunit 127 307 IPR019009 -
Spst2g01402 392 Coils Coil 56 90 - -
Spst2g01402 392 ProSiteProfiles small GTPase Arf family profile. 122 326 - -
Spst2g01402 392 Coils Coil 263 283 - -
Spst2g01402 392 CDD SR_beta 129 328 IPR019009 -
Spst2g01402 392 PANTHER TRANSFERRIN 101 329 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01402 74 329 Miscellaneous Gene Families AT5G05670 73.152 3.69e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01402 K12272 - gmx:100800572 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01402 2 12766883 12772344 Spst2g01402 2 12766883 12772344 ECH