Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01401 ATGAAAGCTGAAGCTGAAGACTTTGGTCCAAAGGAAGGAGGAGTAGGTGGAGTAAGAAAAATGGCGCGCAAGAAGATCAGAGAGTACGACTCCAAGAGGTTGTTGAAGGAGCACTTTAAGAGACTCTCTGGCAAGGAGTTGCCGATCAAGTCTGCACAAATTAATGCATCAACTGATTTCACTGAGCTACAAGAGAAGGAACCTTGGCTTTCATCTTCTAAATTGGTCGTGAAACCTGACATGTTATTTGGAAAGCGTGGCAAAAGCGGTTTGGTTGCTTTGAATTTGGATTTTGCACAGGTTGTTTCATTTGTTAAAGAACGTCTTGGAAAAGAGGTCGAGATGAGTGGATGCAAAGGACCCATAACAACTTTCATCGTTGAACCTTTCATCCCACACAATGAAGAGTTTTACCTTAACATTGTCTCTGAGAGACTTGGGAACAGCATAAGCTTTTCTGAATGTGGAGGAATTGAAATTGAAGATAACTGGGAGAAGGTTAAGACTGTATTTGTTCCAACTGGAGTGTCTATTACATCAGAAATTGTTGCCCCGCTTGTTGCAACCCTTCCCTTGGAGATCAAGGGAGAGATTGAGGAGTTTCTCAAAGTGGTTTTCACTCTGTTTCAAGATCTGGATTTCACTTTCTTAGAGATGAATCCTTTCACATTGGTTGATGGAAAGCCTTATCCTTTGGATATGAGAGGCGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAGAAATGGGGAGACATTGAATTTCCACTGCCATTTGGAAGGGTTATGAGTGCTACCGAGTCTTTCATTCATGGATTAGATGAAAAGACAAGTGCATCTTTAAAATTCACTGTGTTGAACCCAAAGGGCCGAATTTGGACAATGGTAGCTGGGGGAGGTGCTAGTGTCATCTATGCTGATACGGTAGGAGATCTTGGCTTTGCATCTGAGCTTGGAAACTATGCTGAATACAGTGGTGCTCCCAAAGAAGACGAAGTCTTACAGTATGCCAGAGTTGTAATTGATTGTGCAACTGCAAACCCTGATGGCCAAAAGAGAGCTCTTGTGATAGGAGGAGGCATAGCCAACTTTACTGATGTTGCTGCTACATTTAGTGGTATAATTCGGGCACTGAAGGAGAAGGAGTCAAAATTGAAAGCAGCAAGGATGAACATCTATGTCAGGAGAGGGGGACCCAACTACCAGAAGGGTCTAGCTTTAATGCGAGCACTTGGAGAGGAGATTGGCATTCCCATTGAGGTTTATGGACCTGAAGCCACAATGACTGGTATATGCAAAGAGGCAATACAATTCATTACTGCTTCTGCTTAA 1332 0.4294 MKAEAEDFGPKEGGVGGVRKMARKKIREYDSKRLLKEHFKRLSGKELPIKSAQINASTDFTELQEKEPWLSSSKLVVKPDMLFGKRGKSGLVALNLDFAQVVSFVKERLGKEVEMSGCKGPITTFIVEPFIPHNEEFYLNIVSERLGNSISFSECGGIEIEDNWEKVKTVFVPTGVSITSEIVAPLVATLPLEIKGEIEEFLKVVFTLFQDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFGRVMSATESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGFASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGQKRALVIGGGIANFTDVAATFSGIIRALKEKESKLKAARMNIYVRRGGPNYQKGLALMRALGEEIGIPIEVYGPEATMTGICKEAIQFITASA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01401 443 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 24 256 - -
Spst2g01401 443 FunFam ATP-citrate synthase alpha chain protein 21 253 - -
Spst2g01401 443 Gene3D - 260 442 IPR016102 -
Spst2g01401 443 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 23 412 IPR005809 GO:0006099
Spst2g01401 443 SUPERFAMILY Succinyl-CoA synthetase domains 277 423 IPR016102 -
Spst2g01401 443 Gene3D - 21 253 - -
Spst2g01401 443 FunFam ATP-citrate synthase alpha chain protein 260 442 - -
Spst2g01401 443 Pfam ATP-grasp domain 26 223 IPR013650 -
Spst2g01401 443 Pfam ATP citrate lyase citrate-binding 261 437 IPR032263 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01401 Spst-Chr2 12758803 12762917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01401 21 443 Acyl Lipid Metabolism Gene Families AT1G10670 89.598 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01401 K01648 - gmx:100818180 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01401 2 12758803 12762917 Spst2g01401 2 12758803 12762917 ECH