Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01397 ATGGCCACTTTTGTTCCTTCTTCTTCTTCCATTTTCCGACCAAAGTTGGTTCGGTGCACCAACGAGCGCCGGGCGCTGTTTAGCCGCATTGCTCCTGTCTATGATAACCTGAATGACTTGCTGAGCCTCGGGCAACACCGTATTTGGAAGCGGATGGCGGTGTCGTGGACTGGAGCGAAATCGGGAGACCGTGTGTTGGATGTGTGCTGCGGAAGTGGGGATTTGTCCTTTCTCTTGTCCGACAAAGTAGGCTGTGATGGCAAGGTGATTGGTCTTGATTTCTCGAAGGATCAACTATCGGTAGCTTCATCCCGGCAGCAGTTGCTTTCAAAGAAGTCCTTCACGAATATTGAGTGGGTTGAAGGTGATGCTCTTGACTTGCCATTTTTGGATGGTTGGTTTGATGCTATCACTATGGGCTATGGTCTTCGAAATGTGGTTGATAAGTATAAGGCCATGCAAGAAATTTTCCGTGTCCTAAAAGCTGGCTCTACAGTGTCTATCCTGGACTTTAATAAAAGCAACGAGTCACTAACTTCTGCAATTACGGAATGGATGATTGACAATGTTGTTGTCCCTGTTGCCTCTGATTATGGTCTTTCAGAGGAGTACAGATACCTCAAAAGTTCAATAAGAGAATTTTTAACAGGGAAGGAATTGGAGAAACTTGCCATGGAAGTAGGGTTTTCTGCTGCCCGACATTATGAGATTGGAGGAGGCCTCATGGGGTGTTTGGTAGCGAAGCGTTAG 750 0.4667 MATFVPSSSSIFRPKLVRCTNERRALFSRIAPVYDNLNDLLSLGQHRIWKRMAVSWTGAKSGDRVLDVCCGSGDLSFLLSDKVGCDGKVIGLDFSKDQLSVASSRQQLLSKKSFTNIEWVEGDALDLPFLDGWFDAITMGYGLRNVVDKYKAMQEIFRVLKAGSTVSILDFNKSNESLTSAITEWMIDNVVVPVASDYGLSEEYRYLKSSIREFLTGKELEKLAMEVGFSAARHYEIGGGLMGCLVAKR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01397 249 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 25 248 IPR004033 GO:0008168
Spst2g01397 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 241 IPR029063 -
Spst2g01397 249 Gene3D Vaccinia Virus protein VP39 29 249 IPR029063 -
Spst2g01397 249 CDD AdoMet_MTases 64 163 - -
Spst2g01397 249 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 12 249 IPR004033 GO:0008168
Spst2g01397 249 PANTHER METHYLTRANSFERASE 31 231 - -
Spst2g01397 249 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 22 249 IPR032904 GO:0042372|GO:0052624
Spst2g01397 249 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 34 49 IPR023576 GO:0008168
Spst2g01397 249 Pfam ubiE/COQ5 methyltransferase family 25 243 - -
Spst2g01397 249 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 14 249 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01397 Spst-Chr2 12673516 12676897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01397 60 186 Acyl Lipid Metabolism Gene Families AT3G18000 29.921 1.24e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01397 K23095 - gmx:100789470 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01397 2 12673516 12676897 Spst2g01397 2 12673516 12676897 ECH