Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01371 ATGGCGTCGTCGGAGGAGAAGCGAGTGGAGGACGAGTTATCGTACCCGATTATGGTGGCGGAGCGAGTTCGCTCGGCGGTGGACGAGGCCGACTCCTTCAAACACGAGTGCTCGGAGGTGTGGAAGCAGGTCGATCGCCTCCTTCAAATGCTCCGAACGCTCGTCCGCTTCGCTACCGCCACAACTACTTCGGCCCCCGCGCCGCCGCTCTATGAGCGTCCTATCCGCCGCGTCGCTGCCGAGATGGCGAAGAATCTCGACCGCGCCCTCGCCCTTGTGCGCAAGTGCAAGCGCCGGAGCATCCTCCACCGCGTCGTCTCCATAGTCGGCGCTGCCGATTTCCGGAAAGTCCTCGCCCACCTCGACGCGTCCGTCGGCGATATGAAGTGGCTCCTCAGCATCTTCGACGCCGACGGTGGCATTGTCCTCTCTCTCCCTCCGATCGCCAGCAACGACCCCATTCTCTCTTGGGTATGGTCTTTCATCGCTTCCCTTCAAATGGGTCAATTAAACGATAGAGTTGAGGCTGCGAATGAACTTGCTTCTTTAGCACAAGATAACGATAGGAATAAGAAGATCATAGTTGAGGAATGTGGGGTGCCTCCTTTGTTGAAGCTTTTCAAAGAAGGGACTTCCCCTCTTGCTCAAATTGCTGCCGCTAGTGCTTTGTGTCATTTGGCTAATGATTTGGATAGGGTTAGAGTGATTGTGAGTGAGCTTGGTGTGCCTGCTGTTGTGCAGGTTCTTAGTGACTCCCCCATGAGGGTTCAGACCCTGGCTGCCAATTTGGTTGCCAGGATGGCAAAGCATGACCCCGTGGCCCAGGAGGATTTTGCCCGGGAGAACGTGATTAGACCGCTTGTGACACTCTTGTCGTTTGATACCTTTGTGGATGATTCATTAGGGCATTTGGGGAAGCAGAGTATTCATTCTATTGTTCAGATTAATAAGGAGTTGGGAAAGGGTAACCGGGGAGGTCGCCATTTTTCGAATTCCTACTCGAATTCGTATTTGTCTATGGAGGGAAGTAGCCGGGGAGGGAATCATAGGAAGGATAGGGAGAATGAGGATCCTGCGGTGAAGCTTCAGCTGAAGGTTAGTTGCGCTGAGGCTTTGTGGATGCTTGCGCAAGGGAGTGTGACCAACAGTAGGAAGATAACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGATTGTTCAGAATGAGCAAGGAGAGCTGCAGTTTAATTGCTTGATGACGATAATGGAGGTAACTGCAGCTGCTGAATCCAATGCTGACCTTCGGCGAGCAGCGTTTAAGACCAATTCTCCGGCTGCTAAGACTGTTGTGGAACAGCTGCTGAGGATAATTACAGAGGTGGATAGCCCGGCATTGCAAATTCCAGCGATGAAGTCCATTGGTGCGTTGGCTAGGACGTTTCCCGCTAGAGAGACTCGGGTAATTGAACCTCTAGTGGCACAGATGAGTAATAGAAATGTAGAAGTAGCAGATGCGGCAGCAGTTGCTCTTACCAAATTTGCTTCTCCGGATAATTTTCTACATGTGGAGCATTCTAAGAAGATAATTGAATTCAACGGCATCCCGGCCCTGATGAGACTGCTTAGGAGTAATGAAGTTGCCCAGATGCACCACGGACTAACTCTTCTTTGCTACCTTGCACTGCATGCTGGCAACAGTGAGTCCTTGGAACAAGCAAGGGTGTTGACAGTGCTAGAGGGTGCAGACAGAACAGTTCTTCCTCAGCATATGAAGGATTTGGTCTCCAGGGCAATAATCCACCTCAATTTGTATCATGCAGGAATGAATTCTCAAAGGATGTCATATTTGCCTTGA 1833 0.5117 MASSEEKRVEDELSYPIMVAERVRSAVDEADSFKHECSEVWKQVDRLLQMLRTLVRFATATTTSAPAPPLYERPIRRVAAEMAKNLDRALALVRKCKRRSILHRVVSIVGAADFRKVLAHLDASVGDMKWLLSIFDADGGIVLSLPPIASNDPILSWVWSFIASLQMGQLNDRVEAANELASLAQDNDRNKKIIVEECGVPPLLKLFKEGTSPLAQIAAASALCHLANDLDRVRVIVSELGVPAVVQVLSDSPMRVQTLAANLVARMAKHDPVAQEDFARENVIRPLVTLLSFDTFVDDSLGHLGKQSIHSIVQINKELGKGNRGGRHFSNSYSNSYLSMEGSSRGGNHRKDRENEDPAVKLQLKVSCAEALWMLAQGSVTNSRKITETKGMLCLAKIVQNEQGELQFNCLMTIMEVTAAAESNADLRRAAFKTNSPAAKTVVEQLLRIITEVDSPALQIPAMKSIGALARTFPARETRVIEPLVAQMSNRNVEVADAAAVALTKFASPDNFLHVEHSKKIIEFNGIPALMRLLRSNEVAQMHHGLTLLCYLALHAGNSESLEQARVLTVLEGADRTVLPQHMKDLVSRAIIHLNLYHAGMNSQRMSYLP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01371 610 Gene3D - 161 324 IPR011989 -
Spst2g01371 610 Gene3D - 354 576 IPR011989 -
Spst2g01371 610 SUPERFAMILY ARM repeat 168 571 IPR016024 -
Spst2g01371 610 Coils Coil 167 187 - -
Spst2g01371 610 Gene3D - 11 134 IPR036537 GO:0007166
Spst2g01371 610 PANTHER ARMADILLO REPEAT ONLY 4 8 598 - -
Spst2g01371 610 SMART arm_5 186 228 IPR000225 GO:0005515
Spst2g01371 610 SMART arm_5 229 269 IPR000225 GO:0005515
Spst2g01371 610 SMART arm_5 468 508 IPR000225 GO:0005515
Spst2g01371 610 SMART arm_5 514 554 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01371 Spst-Chr2 12395554 12397386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01371 - - gmx:100779659 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01371 2 12395554 12397386 Spst2g01371 2 12395554 12397386 ECH