Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01357 ATGCCAAGCATGGAGGATTCACCGTCAGGAGAAGCAAAGCTTCCACTGCTAGAATCTCATCCTCTAACAGATGAAAGAGATGATGAAGAAGACCAAACACTGGTACGGAGGTTTTGGTTCGAGTCAAAGAAGCTTTGGCACATAGTAGGCCCTACAATTTTCAGCCGTGTTGCATCCTATTCCATGTTAGTCATCACCCAAGCCTTCGCTGGCCACCTTGGTGACCTCGAACTTGCTGCCATATCCATTGCCAACAATGTCGTTGTTGGCTTCGACTTTGGTCTCTTGTTGGGTATGGCAAGTGCCTTAGAAACGCTATGCGGGCAAGCCTTTGGAGCAAAAAAGTACTACATGTTAGGCGTTTACATGCAGCGTTCATGGATCGTTCTTTTCATTTGCTGTATCTTGCTTTTGCCTTTGTACTTCTTTGCCTCGCCAGTGTTGAAGCTGTTGGGGCAGCCCGGCGACTTGGCGGAGTTATCCGGTGAGGTTTCCATTTGGATGCTACCGGTGCACTTCGCCTTTGCGTTTCAGTTCCCTCTGCAGAGGTTTTTGCAGTGCCAGCTCAAGACGGGGCCTATTGCGTGGGTGTCTCTGGTGGCGCTCTTGGTGCATGTGTTTATCAGCTGGTTGTTCGTGTTCCAGCTCCAGTTCGGAGTTGTTGGTGCTGCTGCAACCATTAACTTCTCGTGGTGGGTGTTCACCTTGGGGCTTTTTGGGTACTGTGTTTGGGGTGGGTGCCCTCACACTTGGGCTGGTTTTTCAGTTGAAGCGTTCTCTGGGCTTTGGGAGTTTGTCAAACTCTCTGCTGCTGCTGGAGTCATGCTTTGCGTGGAGAATTGGTTTTACAAAATTCTGATAGTGATGACCGGAAACCTTGAGAATGCAGAGATTGCGGTGGATGCTTTATCCATATGTATGACCATCAATAGCTTAGAGCTGATGATTCCTCTGGCATTCTTCGCTGCAACGGGAGTGAGGGTTGCAAACGAGCTTGGAGCTGGGAACGGTAGAGGAGCCAAGTTTGCTACTATAGTATCTGTGGTGACATCTGTTATCATAGGACTCTTCTTCTGGATGTTGATTTTGTTGTTGCATGATAAATTCGGATACATATTCACTAATAGCAAACCTGTCCTTGACGAAGTAAATAACCTTTCTCTTCTATTAGCCTTCACAATTCTGCTCAACAGTGTTCAGCCAGTTCTCTCAGGAGTGGCTGTAGGATCAGGTTGGCAATCATATGTTGCATACATAAACGTGGGTTGCTACTATATTATTGGGGTGCCTCTTGGATTTTTTATGGGCTGGGTCTTCAATCAAGGAGTTATGGGAATCTGGGCGGGGATGATTTTCGGTGGCACAGCAACTCAGACATTAATATTAAGCATCATTACTATGCGGTGCGACTGGGACAAAGAAGCTGAGAAAGCCACATTGCATCTGGCGAAGTGGGCAGATCCAAAACAAGAACTGAACTAA 1482 0.4723 MPSMEDSPSGEAKLPLLESHPLTDERDDEEDQTLVRRFWFESKKLWHIVGPTIFSRVASYSMLVITQAFAGHLGDLELAAISIANNVVVGFDFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWIVLFICCILLLPLYFFASPVLKLLGQPGDLAELSGEVSIWMLPVHFAFAFQFPLQRFLQCQLKTGPIAWVSLVALLVHVFISWLFVFQLQFGVVGAAATINFSWWVFTLGLFGYCVWGGCPHTWAGFSVEAFSGLWEFVKLSAAAGVMLCVENWFYKILIVMTGNLENAEIAVDALSICMTINSLELMIPLAFFAATGVRVANELGAGNGRGAKFATIVSVVTSVIIGLFFWMLILLLHDKFGYIFTNSKPVLDEVNNLSLLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINVGCYYIIGVPLGFFMGWVFNQGVMGIWAGMIFGGTATQTLILSIITMRCDWDKEAEKATLHLAKWADPKQELN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01357 493 CDD MATE_eukaryotic 41 477 IPR045069 GO:0042910|GO:1990961
Spst2g01357 493 NCBIfam MATE family efflux transporter 51 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g01357 493 MobiDBLite consensus disorder prediction 1 28 - -
Spst2g01357 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 34 471 - -
Spst2g01357 493 Pfam MatE 273 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g01357 493 Pfam MatE 51 211 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01357 Spst-Chr2 12236414 12240281 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01357 K03327 - gmx:100796652 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01357 2 12236414 12240281 Spst2g01357 2 12236414 12240281 ECH