Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01253 ATGGAGGTTTCTCCCCCACCAAATTTCCTTTCTGAAACCCTATGCTCATCCGATTCTGTTGGTGATTGTTGCGGTGATTGCGGTCAGTTATCGGCCGTCGGTGAATCTACGGTACCTGCGGATTACGGTGTTTGTTGTGAAGTTGCCGCCCAAGAGGATGCCAATATGCCCTCACAGTTCCAGCAACTCAACAACAATTCGACTTTGCTGTTGGCTTCGTGTTCACCCGTCTCTGCGGTGGCGCCGGAATCGTGGGTTGCTACCCAAGGGAACTGGCTTTTAGATGAGAATGATGATTCAATGGGTGCAGAATCTGCATATGAATTTGGGCTTTCTAACATGGTTGTGATCCTTGGAGCAGGACTTTCAAATCTTGGCAATACATGCTTTCTTAATGCTATTCTGCAATGCTTTACACATACGGTGCCTCTAGTGCAGGGTATTCGTGCGTGTACTCATAATTTCCCTTGTGCTGGTCATATGGATGGCTTCTGTGTTATCTGCACTTTCCGTGACCAGTTTGAAAGATCCTTAGCTGCTTCTGGACGGACTATTTCACCCTTGAATTTTGTGAACAATTTGAGCTCCATAACAGATTTTTCTTCTGCATTTAGAAGATATCAGCAGGAGGATGCCCATGAATTTATGCAGTTTGCCTTAGATAAACTGGAAAGGTGTTTCCTAGATTTGAAGAAGACCGATATAAATTTTGAAGATGATAATCTTGTACAGAAAGTATTTGGAGGTCGTCTCATTAGCAGACTTCAATGTTGTAGCTGTGGTCGCACTTCTGATACATATGAGCCATTAATTGACATGAGTTTAGAGATAGAAAATGTAGATTCTCTTCCAAGTGCTCTTGAATCATTTACTCAGGTGGAAAACATTGATGCAAACTTTAGATGTGATAGCTGCAAAGACGAAGTGTCCATGGAGAAGCAGCTTATGTTGGATAAGACACCATCAGTGGCAGCATTTCATTTAAAGAGATTTAAGACAGATGGGATCCTTGTTGAAAAGATTGACAAGCATATTGATTTCCCATTGGAGTTAGATTTGCAGCCTTACACCATTTCTAATCAAAACAACGATGTACTGTTGAAGTATGATTTATATGCCGTTGTTGTGCATACTGGATTTTCTTCTACTTCAGGGCATTACTTCTGCTTTGTTCGCTCTGGTTCAGACACATGGCACAAGTTGGATGATTCTATGGTTACTGAGGTATCAGGAGACTCTGTACTGTCTCAGGAAGCATACATACTGTTTTATGCACGACAGGGCACTCCATGGTTTTCTAGTTTTATGGAATCTGAAAAACAAGGCTTGGATCCAAATATCACGAGTACATCTCCTACGTCTGTTTTAGACGTTGGTGATGGCATATCTAAATCGAATCCTATTTTAATTCCAAATACTGAAAGGGGTGGTGCTGTTGAATCCAAAGGATGTTCTGAGCCTTCGGTTGATTATTTTTGTCCAGAAGAAGTTGCTTGTTTAGAAACAAATGAAACTAGAGACGCTACTCATAACTGTGGACAATTTCTCCATGGTTCAAGTCAGGCAGACATTTATTTCCATAGCAGCTCTAAAGATGTTGAAACCCAAAAGTTGTTCAGCAACAGGGTCACCTTTGATGGTCGTGCCATGTTTGATGGAAGATCATATGGTGAGAATGCTAGTCTTGATAATAACTATGACTGTGAGGAAGCTGTTGATTTTAGAGAGAATGCTGGTGGTTGTTCATTATCTCTGCCTTCTCCTCCGCCTACCTCCCCTCTTGATGATGCTTCAGATAAATTTCATACCTCGCGTGATAATTCTAAGGCGAATAAGCGGAGCCGTAAAAAGTCATCCAATCAATGTAACGAGGATCCTGAAAGACGAGAAGCCGTGAAATATCTTTGCAAGGCTGGTTCAAGGAGAGAGGCACTTATGAAATTTGTTGCTCAGGATGAAGTTCCGGACAAAAAGAGAAAAAAAATGAATTCATCGCAGTGTAAGAAAACCACCTCTCTTGGCCGCAAAAAATCAAACCAAACATCTGTCAGCCGCCCTGTGGCAGCTGGAATTTCACAGTGA 2082 0.4188 MEVSPPPNFLSETLCSSDSVGDCCGDCGQLSAVGESTVPADYGVCCEVAAQEDANMPSQFQQLNNNSTLLLASCSPVSAVAPESWVATQGNWLLDENDDSMGAESAYEFGLSNMVVILGAGLSNLGNTCFLNAILQCFTHTVPLVQGIRACTHNFPCAGHMDGFCVICTFRDQFERSLAASGRTISPLNFVNNLSSITDFSSAFRRYQQEDAHEFMQFALDKLERCFLDLKKTDINFEDDNLVQKVFGGRLISRLQCCSCGRTSDTYEPLIDMSLEIENVDSLPSALESFTQVENIDANFRCDSCKDEVSMEKQLMLDKTPSVAAFHLKRFKTDGILVEKIDKHIDFPLELDLQPYTISNQNNDVLLKYDLYAVVVHTGFSSTSGHYFCFVRSGSDTWHKLDDSMVTEVSGDSVLSQEAYILFYARQGTPWFSSFMESEKQGLDPNITSTSPTSVLDVGDGISKSNPILIPNTERGGAVESKGCSEPSVDYFCPEEVACLETNETRDATHNCGQFLHGSSQADIYFHSSSKDVETQKLFSNRVTFDGRAMFDGRSYGENASLDNNYDCEEAVDFRENAGGCSLSLPSPPPTSPLDDASDKFHTSRDNSKANKRSRKKSSNQCNEDPERREAVKYLCKAGSRREALMKFVAQDEVPDKKRKKMNSSQCKKTTSLGRKKSNQTSVSRPVAAGISQ 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01253 693 MobiDBLite consensus disorder prediction 666 693 - -
Spst2g01253 693 MobiDBLite consensus disorder prediction 579 629 - -
Spst2g01253 693 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 369 387 IPR018200 GO:0004843|GO:0006511
Spst2g01253 693 FunFam Ubiquitin carboxyl-terminal hydrolase 20 116 430 - -
Spst2g01253 693 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 121 136 IPR018200 GO:0004843|GO:0006511
Spst2g01253 693 MobiDBLite consensus disorder prediction 651 693 - -
Spst2g01253 693 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 120 427 IPR028889 -
Spst2g01253 693 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 68 427 - -
Spst2g01253 693 SUPERFAMILY Cysteine proteinases 120 426 IPR038765 -
Spst2g01253 693 Gene3D Cysteine proteinases 119 429 - -
Spst2g01253 693 Pfam Ubiquitin carboxyl-terminal hydrolase 121 424 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01253 Spst-Chr2 11102638 11106130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01253 121 490 Miscellaneous Gene Families AT4G31670 32.982 3.51e-54 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01253 K11855 - gmx:100808015 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01253 2 11102638 11106130 Spst2g01253 2 11102638 11106130 ECH