Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01216 ATGGGTTTACTTGGAAAAGGGGTGGTAGTGCGAACTGCAGAGTCTTCAGAGGGGAAACGTCTCCACCAGTATGGTTGTACTCTTCTGGCTTGGTTTCTACCAAATCCTGCCATTCGCCGACTCAACCACATAAGAGGCAGTGATTTGGTAGATCGGGGTTGGGATTGGTTGTGCTCCGTGTTTGAACTGATTTTGATGTTTTTTCCGAGCAGAGCCGATTCAGGGAAAAGCATGTTGAGTGTGCACACTACCTTCATGCATGGCTGGCTCACAAAACTTGTAAGGCAAGGACAACTCAAGCCTCAGTTAAGCACTACATGGGCTATATGTCCAGAAATGGAAGTGAAAACCGCTAAGGCATTGGATAGGATTGCACTTAAATTGAAGAGAAAGCGAGCTACCCAATATGCTGCACATATGTGTGGAGCTTCACAACCAACAGACGGGGTTGTCAAACGGATAAAATTGGGTGAATATAGAAAAAAGATTGCAAATGCTGGTTCACATATTGGGAAGTCCTTGAGTAACCGCTTTTTAAGTTATAAGAAGAGTGGGAGACCAACACAACTGATGTTCTATAAGGATGGTGAGTGGGTGGACTTTCCTAACAATATTCTTGACTTGGTTAGGAAAGATCTTGAAATAAAGAAGTCGGTTGTGGAGGTGGAGTTAAATGGGTATCATATGGTGTTAAATTTTTTCCATATGTATAAGTTGGACTTGAAAACTGGTTTGCAACAACCAATGGCTTGGATTGATGAAGCAGGAGGCTGCTTTTTCCCTGAGGTCTATGCTGCTTATGATGAAGAGCCTTATAATCTCTACAAACAGTACAGTGGTAAAAGTACAGAATCGTATGATTCCAATGAAATAAAATTACAGTTAGAAATTGAAATAAATGGGCTGGATCAGTGGAAGTTGAGGGAGTGTAGTGAGGAGTCCAATTCTTTGGTTAAGGGTATTAGAATTGATACTAAACAAGACTGTTGTCCATATGATGTAGAAGTAGAAAATAGTATTAACAAAAAGGACTGTGAAATTGTTGGTGAATCTATACAGCAAAATCAAGACATAGATTTAGATGCCTATACTGAATCTGTATATGGAAAGTTGGATTTGGATTCTGTACAGAAGATGTTTCTTAACGGAATGAACAACAATGGCATTACTAATTCTCACATTGTTGGGATTGACCAGTGCTCAGGTGCTTCAATGCAATCACGATGGGAGCTATTCCAGAAGCAAGCTGAAATTACCAAAAATTGTCGTGGGGATGCTAATATTCAGTATGCTTGGCTTGCTTCTTCTAAAGGAGAACTGTCTACAATGATGGAGTATGGGCTTGGCCACTGTAGACTATCTGCATCAAAATGCACATATGGCAATGGTGTTAATCTTGCAGCTGTTAACTGCCCTGGCACCAGTGCACGTTATTGTGATGTTGACGAAAATGGGGGTCGTTATTTGGTCCTTTGTCGTGTTATAATGGGGAACATGGAGATTCTCCGTCCTGGCACTGGTCAGTTCCAACCCAGCAGCTGTGAATATGATAATGGTGTGGATGACATTCAATGCCCGAGAAATTATGTGGTGTGGACTATGAACATGAACACCCACATCTATCCAGAATTTGTTGTTAGCTTCAAGGTGTCTTTTGATGCTGAAGGCCTTTTTCGAGGAACTGAAAGGAAGAATAATGTTTCTGGGGTTAAGACAGCCTGTCATGACACAAAAGGACTGTTACAGTTAGACACTTGTGCTGTAGTTAAGGGAACAGCTGCCCCAAGAGGTCCAACATCTCCTTGGTTGCCTTTTCCTTTGCTTTTTGCTGCTATCAGAAACAAGGTTCCTCCTAAGGATATGGAACTTCTCAGAAGACATTATGAACAGTTTAGGTCAAAGCAGATATCCCGGGGTGATTTTGTGAAGATGCTGAGGTTAATAGCTGGCGATCCTCTACTGAAACTTGCAATGACACAACTTCAATTGAAGATACAATCCAATGTTGAATCGATAGACTCAAACAAGATGGATATATCCTGA 2043 0.4136 MGLLGKGVVVRTAESSEGKRLHQYGCTLLAWFLPNPAIRRLNHIRGSDLVDRGWDWLCSVFELILMFFPSRADSGKSMLSVHTTFMHGWLTKLVRQGQLKPQLSTTWAICPEMEVKTAKALDRIALKLKRKRATQYAAHMCGASQPTDGVVKRIKLGEYRKKIANAGSHIGKSLSNRFLSYKKSGRPTQLMFYKDGEWVDFPNNILDLVRKDLEIKKSVVEVELNGYHMVLNFFHMYKLDLKTGLQQPMAWIDEAGGCFFPEVYAAYDEEPYNLYKQYSGKSTESYDSNEIKLQLEIEINGLDQWKLRECSEESNSLVKGIRIDTKQDCCPYDVEVENSINKKDCEIVGESIQQNQDIDLDAYTESVYGKLDLDSVQKMFLNGMNNNGITNSHIVGIDQCSGASMQSRWELFQKQAEITKNCRGDANIQYAWLASSKGELSTMMEYGLGHCRLSASKCTYGNGVNLAAVNCPGTSARYCDVDENGGRYLVLCRVIMGNMEILRPGTGQFQPSSCEYDNGVDDIQCPRNYVVWTMNMNTHIYPEFVVSFKVSFDAEGLFRGTERKNNVSGVKTACHDTKGLLQLDTCAVVKGTAAPRGPTSPWLPFPLLFAAIRNKVPPKDMELLRRHYEQFRSKQISRGDFVKMLRLIAGDPLLKLAMTQLQLKIQSNVESIDSNKMDIS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01216 680 SUPERFAMILY ADP-ribosylation 375 550 - -
Spst2g01216 680 Gene3D - 368 551 - -
Spst2g01216 680 Pfam Poly(ADP-ribose) polymerase catalytic domain 397 502 IPR012317 GO:0003950
Spst2g01216 680 ProSiteProfiles PARP catalytic domain profile. 350 569 IPR012317 GO:0003950
Spst2g01216 680 Pfam RCD1-SRO-TAF4 (RST) plant domain 598 662 IPR022003 -
Spst2g01216 680 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 165 662 IPR044964 -
Spst2g01216 680 ProSiteProfiles RST domain profile. 596 667 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01216 Spst-Chr2 10771906 10783412 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01216 - - gmx:100800707 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01216 2 10771906 10783412 Spst2g01216 2 10771906 10783412 ECH