Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01200 ATGGCTTCTAAATTCAAGCATGGGTCCTCTATGGTTCGGAAGATCACGCAGCTGAGCAATGATTTGGATCAGGAGGGTGATAATGGGAGTGTTGGGCTTGCTACCTACACAGTTCACATTCCTCCAACGCCTGATAACCAGCCTATGGAGATTTCCCTGGAGAGGTCAAGTTCTCGGAGAGTGGAAGATCAATATGCTTCCAGTTCTTTGTTCACCGGCGGTTTTAACCAGCTCACACGTGCTCATTTGAAGGACAAGGTGATTGAGTCCGAATCCAGCCATCCCCAGATGGCTGGTGCAAAAGGGTCCTCTTGTGCAGTGCCAGGGTGTGATGGAAGGGTGATGACTGATGAAAGAGGGTTGGATGTAGTCCCTTGTGAGTGCGGTTACAAGATTTGTAGGGATTGTTATAGGGATGCTTTGAGGGCTGGTGAGGGGATTTGTCCTGGTTGCAAGGAGCCTTACAATGAGCCTGATGTGCAAGGTGTGGCCAACTCACAGACACTGCCTTTGCCTCCTGGTTCTGGGGTTAATAAGATGGAGAGGAGGTTGTCGTTGATGAAATCAGGGGCGTTGACGAGGAGCCATACTAATGAGTTTGATCATGCTCAGTGGTTGTTTGAAAGCAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCTAAAGAGTCGGAACCTGATGCCAGTTCTGGTTCTGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGATTGGATGGGAGGTGACCCTAATGTATTCAAAGAAAAGCAGTGGAGGCCCTTGACTCGCAAATTGAGTATTTCTGCTGCAATTCTCAGTCCTTATCGGCTCATTATATTAGTTCGGCTAGTGATTCTAGTGTTCTTTCTAAAGTGGAGGGTCCAAAACCCCAATGATGATGCTGTCTGGCTGTGGGGCATGTCTGTAGTTTGTGAAATATGGTTTGCTTTCTCCTGGGTGCTTGACCAGCTTCCTAAGCTCTTCCCCGTAAATCGTGTTGCGGATCTCGATGTTTTGAAAGAGAAGTTTGAAACTCCTAATCCCGCCAATCCTACTGGGAAGTCGGATCTTCCAGGAATAGATATGTTTGTGTCAACTGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCCAATACCATTCTTTCTATTCTAGCTGCTGACTATCCTGTTGAGAAACTCTCATGTTATGTCTCTGATGATGGAGGTGCGCTCCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCCGATTTGTGGGTTCCTTTTTGCCGGAAGCATGACATTGAACCCAGGAACCCAGAATCTTATTTTAATCTCAAGAGAGATCCCTACAAGAACAAAGTACGTTCTGACTTTGTGAGGGACCGCAGGCGAGTAAAGCGCGAGTATGATGAGTTCAAGGTTCGGATTAATGGCCTTCCAGATTCAATCAGGCGGCGCTCTGATGCTTACAATGCTAGTCAAGAAATCAAAGCCATGAGGAAATGGAGAGAGAATGGAAATGAAGAACCAGTGGAGAATTTAAAAATTCCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCTGGCACTTGGACAACTGCTGCACCAGAGCATTCCAAGGGTGATCATGCCAGTATCATACAGCTGTATTTTGCCGAGCTTCAGGTAATGTTGAAACCCCCAAGTGATGAACCACTGACTGGCACAGCATCAGATTCAAATTCCTTGGATTTAACTGAAGTTGATATTCGTCTTCCTATGCTTGTCTATGTTTCGCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCTGGGGCCATGAATGCCTTGGTTCGAGCCTCAGCCGTAATGTCCAATGGCCCTTTCATTCTCAATCTTGACTGTGACCATTACATATTTAACTCTCAGGCCCTGAGAGAAGGAATGTGCTTCATGATGGACCGTGGTGGAGACAGACTCTGCTATGTCCAATTTCCTCAAAGGTTTGAAGGGATAGATCCCAATGATCGCTATGCAAATCACAACACTGTCTTCTTTGATGTCAATATGCGTGCTCTTGATGGAATTCAAGGTCCTGTATATGTTGGCACAGGATGCCTTTTTAGGAGAACTGCTCTCTATGGCTTTGATCCACCCCGGATCAAGGAAGAGACCGGTTGGTTTGGTAGAAAGAATAAGAAATCCTCGACAGTAGCATCTGTCCCTGATGCTGGTGCTGAGGATCAGTCATTGAGGAATAATGACATTGAGGATGAAGAAATGAGCACTGCTCTTGTTCCCAAGAAATTTGGCAACTCGAGTCTTCTTGTTGATTCCATCAGGGTGGCTGAGTTCCAAGGGCTTCCCCTTGCTGATCATTCATCCATCAAATATGGACGTCCACCTGGTGCCCTAACACTCCCTCGGGACCCTCTTGATGCGGCTACTGTTGCCGAGGCCATCAATGTCATCTCATGCTGGTATGAGGACAAGACTGAATGGGGCCTCAGAATTGGATGGATTTACGGGTCAGTTACTGAGGATGTTGTGACAGGTTATAGAATGCACAATAGAGGATGGAGGTCTATATATTGTGTGACCAAAAGAGATGCATTCCGTGGCACTGCTCCAATCAATCTCACAGACAGGCTTCACCAGGTTCTTCGGTGGGCAACAGGCTCAGTTGAGATCTTCTTTTCACGCAACAATGCTCTTTTGGCCAGCTCTAGATTGAAATTTCTGCAGAGGATTGCTTACCTGAACGTTGGAATCTACCCTTTCACTTCCATCTTCCTTATTGTGTATTGCTTCCTTCCTGCTCTTTCACTCTTCACTGACCAGTTCATTGTTCAAAGCCTTCAAGTCACCTTCCTAGTTTACCTCTTGGGGATAACCTTGACCCTTGTCATCCTTGCTGTTTTGGAAATCAAATGGTCTGGCATTGAGCTTGAAGAGTGGTGGAGGAATGAACAGTTCTGGTTGATTGGAGGCACTAGTGCTCATCTTGCTGCTGTGCTTCAGGGTCTGCTGAAGGTGATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCTGGTGGTGATGACGAAAATGACGAATATGCTGATCTTTATGTCCTCAAGTGGACTTCTCTTATGATACCACCAATCACAATTATGATGGTTAATTTGATAGCCATTGCTGTTGCGGTTAGCAGAACTATATACAGTGAGGATCGTCAATGGAGCAGTTTGCTTGGAGGTGTGTTTTTCAGCTTTTGGGTTTTGGCTCACTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGCAGGACACCCACTATTGTGTTCGTATGGTCAGGTCTAATAGCAATCACTATCTCACTCCTTTGGGTTGCTATTGACCCTCCCTCTGGTAGCAGCCAAATTGGAGGGTCATTCCAACTCCCTTGA 3408 0.4636 MASKFKHGSSMVRKITQLSNDLDQEGDNGSVGLATYTVHIPPTPDNQPMEISLERSSSRRVEDQYASSSLFTGGFNQLTRAHLKDKVIESESSHPQMAGAKGSSCAVPGCDGRVMTDERGLDVVPCECGYKICRDCYRDALRAGEGICPGCKEPYNEPDVQGVANSQTLPLPPGSGVNKMERRLSLMKSGALTRSHTNEFDHAQWLFESKGSYGYGNAMWPKESEPDASSGSGSGSGSGSGSDWMGGDPNVFKEKQWRPLTRKLSISAAILSPYRLIILVRLVILVFFLKWRVQNPNDDAVWLWGMSVVCEIWFAFSWVLDQLPKLFPVNRVADLDVLKEKFETPNPANPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFADLWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNASQEIKAMRKWRENGNEEPVENLKIPKATWMADGTHWPGTWTTAAPEHSKGDHASIIQLYFAELQVMLKPPSDEPLTGTASDSNSLDLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIFNSQALREGMCFMMDRGGDRLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEETGWFGRKNKKSSTVASVPDAGAEDQSLRNNDIEDEEMSTALVPKKFGNSSLLVDSIRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRIGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFTDQFIVQSLQVTFLVYLLGITLTLVILAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSGGDDENDEYADLYVLKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDRQWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAIDPPSGSSQIGGSFQLP 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01200 1135 SUPERFAMILY Nucleotide-diphospho-sugar transferases 374 735 IPR029044 -
Spst2g01200 1135 FunFam Cellulose synthase-like protein D3 88 169 - -
Spst2g01200 1135 Pfam Cellulose synthase 359 1124 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst2g01200 1135 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 565 720 IPR029044 -
Spst2g01200 1135 SUPERFAMILY RING/U-box 94 160 - -
Spst2g01200 1135 MobiDBLite consensus disorder prediction 223 245 - -
Spst2g01200 1135 FunFam cellulose synthase-like protein D3 571 708 - -
Spst2g01200 1135 MobiDBLite consensus disorder prediction 227 243 - -
Spst2g01200 1135 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 168 IPR013083 -
Spst2g01200 1135 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 257 1111 - -
Spst2g01200 1135 Pfam RING/Ubox like zinc-binding domain 107 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01200 Spst-Chr2 10607061 10611159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01200 13 1135 Glycosyltransferase AT3G03050 75.066 0.0 1751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01200 K20924 - gmx:100813900 2048.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01200 2 10607061 10611159 Spst2g01200 2 10607061 10611159 ECH