Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01184 ATGCCCCCAGAAGAAAACCAATATAGAAACAGACCCAAATGCTGGAATTTTCAGGCAAGAATAAATAAAAAGAAAATCCAAAAAAGAGAAGGTGAAAAAAACATCACTTTCAAACTTTATAGTGAGAGAAAGGAGGTGGGGGAGAGTTTAGAGAGAGAAAGAGGGGACGATGAGAATGTACCTGAGAAAAGGGACACAATGAAAGCGAATCCGATCTTTAAATCTAAGGTGCTCTTGCTTTTGCGCTCGAAGAGCCAAAAGACAGAGCTTTCTCAAAAGCCACCACCACCATTGATGAAGGAAAGGAGAAAAAAAGAGAGAAAGGGAAAGGTGAGGCTCAGAAAGTGTGGATCTATGAGATATGATTCGTTTCATGTGGCACAATTTGCTTCTTCATCGGAGGTCTTCTTCCTTGGTCGTGATCTTGTTAGGGTTCCTAGAATTGCAGTTTCCCTTCATTTCTTCGTGTCGCATCGACATCGTGAGTCCTTCACAGTTTTTGTTCCGATAACCCTTGAAATCAACACTGTCACGTGCACAGTACTATATTCTGTTAAGTGCTTGCAAAAATTGGGAGAGTTCAAACTGCCACATTTCTTCAATTACCCACCTTACTTCACTTTGCAGCCAGTAAGAGACACAAGAGAGAAGCAGATACAATTATGGAAAGAGCTTATTTTGGATTATTGTAAAACACAGAAGACATTTGTAATTGGCCTTGAAGAAGAATTTCCTCTATTTACAAATCATGTAATTGAAAGATCTCTTACCCATGAAGCCAGAGAAGCTTTCCTTTCAGCATTAGTTTCTGAAGGTCGTGCAGAATGGATGGATAAAGGACACAGGAAATGTCTTATTCTCTGGCATCGGATTCAAGATTGGGCTGAAATTTTAATACAATTTGCAAAAGAGAATGGGCTGGAAGATGGTGTTGTCACGATTGAAGAAATACGATCAGGGACTGAGTCTCAAGGAACAGAGCTTCATGGAATAGATAGAACTATTTTGAATCGTGCACTGAAACTATTAGAACAGAAAGGAAAGCTCGTGGTTTTTAAAGGAACTTCAACCGACGACGAAGGGGTTAAATTTTCTATATAA 1101 0.3951 MPPEENQYRNRPKCWNFQARINKKKIQKREGEKNITFKLYSERKEVGESLERERGDDENVPEKRDTMKANPIFKSKVLLLLRSKSQKTELSQKPPPPLMKERRKKERKGKVRLRKCGSMRYDSFHVAQFASSSEVFFLGRDLVRVPRIAVSLHFFVSHRHRESFTVFVPITLEINTVTCTVLYSVKCLQKLGEFKLPHFFNYPPYFTLQPVRDTREKQIQLWKELILDYCKTQKTFVIGLEEEFPLFTNHVIERSLTHEAREAFLSALVSEGRAEWMDKGHRKCLILWHRIQDWAEILIQFAKENGLEDGVVTIEEIRSGTESQGTELHGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGVKFSI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01184 366 FunFam vacuolar protein-sorting-associated protein 25 287 365 - -
Spst2g01184 366 SUPERFAMILY "Winged helix" DNA-binding domain 194 294 IPR036390 -
Spst2g01184 366 MobiDBLite consensus disorder prediction 86 109 - -
Spst2g01184 366 Gene3D - 290 365 IPR036388 -
Spst2g01184 366 Gene3D - 191 288 IPR014041 -
Spst2g01184 366 Pfam ESCRT-II complex subunit 200 332 IPR008570 GO:0000814|GO:0071985
Spst2g01184 366 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 189 365 IPR008570 GO:0000814|GO:0071985
Spst2g01184 366 MobiDBLite consensus disorder prediction 46 67 - -
Spst2g01184 366 FunFam Vacuolar protein sorting-associated protein 25 192 287 - -
Spst2g01184 366 SUPERFAMILY "Winged helix" DNA-binding domain 290 364 IPR036390 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01184 K12189 - gmx:100803388 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01184 2 10442958 10454390 Spst2g01184 2 10442958 10454390 ECH