Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01183 ATGGATCAAAATAGGGAAGAGAGCTGGAGGGAGTTAATGAAGAAGATGCTTCCTCCTGGTGCTTCGATACCTGCTGATGCTTCTAATCTTGATTATTCTATAGCTATGGAATATGTTGGTCCGCCAGTTTCATATGAATTGCCAAGAGTTGAGCCTCTTGATGCAAACTCAAAAGCAATTCCCACTGCCGAACCACTCTCTGGATCACAAAGATCAAATACTCATGTGGGTTCTATGGTGATTGAAGCAATCCCTCTACCAGTGTCTCGTATTGCCGGTGTAACAAGTTCTCCTAATCAAAGTCCGAGGGTGTCAGGAAGTTCAGATTCTGTGGTTTCTGTGTTACAAAACCCAGATCTTTCTTCCGCTTCACCTTCAGCTTCACCTGCTTCAGTTCATAATCCTCCAAGTAATCCTCCAAAGCCAGTGGTTAATGAAGTGAAGAGGGCACCAGTTGTCACTTTTAATACTGTTGATAGATCTCAGAGGAAAGAGGTAGAGGTTGTAAAGCCAGTTTATTCAGAATATGTTGGAGTTTTGAAGGAAAGGAAGAAAAAGAAAATAAGAGTGTGTTATAGGTGTGGAAAAGGGAAGTGGGAAACAAAGGAGTCTTGCATAGTGTGTAATGCCAAGTATTGCAGCAACTGTGTGCTAAGGGCAATGGGATCAATGCCTGAGGGGCGCAAATGTGTTACATGCATCGGTCAACCAATTGATGAATCAAAGCGTCTGAAATTGGGTAAATATTCAAGGGTGTTGTCCCGATTGTTAAGTCCTCTAGAAGTCAAGCAAATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCAGAGCAGCTTATCGTCAATGGGTTGGCCCTGAAGCCAGATGAGATGGCAGAATTGCTTGGATGCCCGTTACCTCCACGTAAGATGAAACCTGGTCGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAGAATAATAAGTTCAAACTTGAATTTCACTGGGAAACTTAGCCTCAATGCTAGTGGTGGAAACACTGAGGTGTACATGAATGGTCGAGAGATCACAAAACTTGAGTTGAGGGTACTCAAGCTGGCAAATGTGCAGTGTCCTCGTGATACACACTTTTGGGTTTATGATGATGGTCGTTACGAGGAGGAAGGACAAAATAATATCAGAGGAAACATTTGGGAGAAGGCCTCAACAAGATTCATATGTGCCTTATTCTCTCTACCCTTTCCCCATGGTCAACCTCATGGGCTAAAGGATGAAACTAGTCATTATACAACTGTTCCTATTTATCTGGAACAGAAAAGAACTCAGAAGCTTCTTCTTCTTGGAATTCAAGGATCTGGTACTAGCACTATATTTAAGCAGGCCAAGTTTTTGTATGGGAACAAATTTTCTGCTGAAGAGCTGCAGGATATTAAACTTATGATCCAGAGTAACATGTATAAATATCTTAGTATTCTACTTGACGGGAGAGAGCGATTTGAAGAGGAAGCTGTTTCTAGAATGAATGGACAAGGTTCTCCTGGTCAAACTATCGAAACAGGTAAAAATCATGAAGCAGGTAATACTAGTGAATGCATCTATTCCCTCAACCCAAGGCTAAAACATTTCTCTGATTGGCTCCTCGACATTATAGCCACTGGGGATTTAGATGCCTTCTTCCCTGCAGCCACACGTGAATATGCACCATTAGTTGAAGAAGTATGGAAGGATCCTGCTATACAAGAAACCTTCAAAAGAAAAGATGAGCTTCACTTTCTTCCAGATGTTGCTGAGTACTTCTTAAGCCGGGCTGTGGAGATATCTAGCAATGAATACGAACCTTCTGAAAGGGACATAGTATATGCAGAAGGGGTCACTCAGGGAAATGGTTTGGCTTTCATGGAATTTTCACTTGATGACCGTGTCCCAAAGTCGGACGCTTATTCAGATAACCTAGATGCTCAGCTGCCACCACTGACCAAGTATCAACTCATAAGAGTGAATGCGAAGGGCCTTAATGAGGGCTGCAAGTGGGTTGAAATGTTTGAAGACGTTCGAGCTGTGGTCTTTTGCGTTTCCCTAAGTGACTATGATCAGTTGTGGCTTTCCCCTGACAGTAATGGCAGTGGAACACTTGTTCAGAACAAGATGGTACAAAGCAAGGAGCTTTTCGAGACCATGGTGAGACACCCTTGCTTCAAAGACACCCCTTTGGTTCTGGTCCTTAACAAGTATGATATATTTGAGGAAAAGATTAGCAGGGTGTCCCTAAATACATGTGATTGGTTCAGTGATTTTTGTCCCGTGCGTGCACACCATAATAACCAGTCACTGGCCCATCAAGCCTACTTCTATGTTGCCATGAAATTCAAGGACCTCTATGCATCCCTCACGGGAAAAAAACTCTTTGTGGCACAAGCCAGAGCAAGGGACCGAGTAACTGTTGATGATGCATTCAAGTACATAAAAGAGGTCCTCAAATGGGATGAAGAGAAGGAGGAAAATTTCTACGGTCCACCTGAGGATTCATTTTACAGCACAACTGACATAAGCACCTCTCCCTTTGTCAGACAAGAGTGA 2589 0.4291 MDQNREESWRELMKKMLPPGASIPADASNLDYSIAMEYVGPPVSYELPRVEPLDANSKAIPTAEPLSGSQRSNTHVGSMVIEAIPLPVSRIAGVTSSPNQSPRVSGSSDSVVSVLQNPDLSSASPSASPASVHNPPSNPPKPVVNEVKRAPVVTFNTVDRSQRKEVEVVKPVYSEYVGVLKERKKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGLALKPDEMAELLGCPLPPRKMKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSLNASGGNTEVYMNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFICALFSLPFPHGQPHGLKDETSHYTTVPIYLEQKRTQKLLLLGIQGSGTSTIFKQAKFLYGNKFSAEELQDIKLMIQSNMYKYLSILLDGRERFEEEAVSRMNGQGSPGQTIETGKNHEAGNTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDIVYAEGVTQGNGLAFMEFSLDDRVPKSDAYSDNLDAQLPPLTKYQLIRVNAKGLNEGCKWVEMFEDVRAVVFCVSLSDYDQLWLSPDSNGSGTLVQNKMVQSKELFETMVRHPCFKDTPLVLVLNKYDIFEEKISRVSLNTCDWFSDFCPVRAHHNNQSLAHQAYFYVAMKFKDLYASLTGKKLFVAQARARDRVTVDDAFKYIKEVLKWDEEKEENFYGPPEDSFYSTTDISTSPFVRQE 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01183 862 MobiDBLite consensus disorder prediction 838 862 - -
Spst2g01183 862 Pfam G-protein alpha subunit 442 828 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 MobiDBLite consensus disorder prediction 844 862 - -
Spst2g01183 862 Gene3D - 647 839 IPR027417 -
Spst2g01183 862 PRINTS Alpha G protein (transducin) signature 688 716 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 PRINTS Alpha G protein (transducin) signature 741 750 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 PRINTS Alpha G protein (transducin) signature 615 637 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 PRINTS Alpha G protein (transducin) signature 447 462 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 MobiDBLite consensus disorder prediction 117 145 - -
Spst2g01183 862 ProSiteProfiles G-alpha domain profile. 444 840 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 835 IPR027417 -
Spst2g01183 862 MobiDBLite consensus disorder prediction 117 131 - -
Spst2g01183 862 SUPERFAMILY FYVE/PHD zinc finger 165 234 IPR011011 -
Spst2g01183 862 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 221 833 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 CDD G-alpha 446 832 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 Gene3D - 475 626 IPR011025 GO:0007165
Spst2g01183 862 FunFam Extra-large guanine nucleotide-binding protein 3 475 626 - -
Spst2g01183 862 SMART galpha_1 427 818 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst2g01183 862 FunFam Extra-large guanine nucleotide-binding protein 3 640 838 - -
Spst2g01183 862 SUPERFAMILY Transducin (alpha subunit), insertion domain 473 625 IPR011025 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01183 Spst-Chr2 10436687 10442376 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01183 - - gmx:100794534 1615.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01183 2 10436687 10442376 Spst2g01183 2 10436687 10442376 ECH