Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01136 ATGGGTAATCCACGGAGACCGAGGAGCGCCGACGACCTTCATACGGCGGCAAGGTCCGGTGATCTCATTGCCGTTCAGTCAATTTTGGCTTCAAATCCTTTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCTCTACATTTAGCAGCATTTTCTGGGCAAGCGGAGGTAGTCGCTTATCTCTGCAAGCACAAGGCTGATGCTGGTGCTTCTGCTATGGATGACATGGCTGCAATACACTTTGCTTCACAGAAGGGACATTTAGAAGTTGTTCGTGCTCTAATTTCAGCTGGGGCCTCTCTCAAAGCATTTACCCGCAAAGGCATGACATCATTACACTATGCTGTTCAAGGTTCCCATCTGGAACTCGTCAAGTACTTGGCCAAGAAAGGGGCAAACCTTGGTGCCCAGACAAAGGCAGGAAAGACCCCTTTGGATCTTGCTAGCAAAGAAGAAATCCGATCCTTTCTGGAGGAATATCAGAAGTCAGCAAAAAATGGAGAACTGGGCGAGGAAGATAAAGATACAGCTGAAGAATCTGATCCCAAGGCATCTGAATTGGGATCGGAAGGTGATTTGAATACTGAACCTCCTGCAGCTGCTGTTGATGAAGAAAACAATGTGGGAGAGAAGAGAAAGGGTAATGACGATGACACAAGACAAGAGTCGTCGCAACCAAAAAAAGCGAGAGTTAAGTTAAGCCATCTCCAAAGTTCAGATGATACCCAAGAAGAAGAGAACATGTAG 750 0.4653 MGNPRRPRSADDLHTAARSGDLIAVQSILASNPLAVNSRDKHSRTPLHLAAFSGQAEVVAYLCKHKADAGASAMDDMAAIHFASQKGHLEVVRALISAGASLKAFTRKGMTSLHYAVQGSHLELVKYLAKKGANLGAQTKAGKTPLDLASKEEIRSFLEEYQKSAKNGELGEEDKDTAEESDPKASELGSEGDLNTEPPAAAVDEENNVGEKRKGNDDDTRQESSQPKKARVKLSHLQSSDDTQEEENM 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01136 249 ProSiteProfiles Ankyrin repeat region circular profile. 108 135 - -
Spst2g01136 249 ProSiteProfiles Ankyrin repeat region circular profile. 42 68 - -
Spst2g01136 249 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Spst2g01136 249 PANTHER ANKYRIN REPEAT PROTEIN 11 206 - -
Spst2g01136 249 MobiDBLite consensus disorder prediction 164 187 - -
Spst2g01136 249 PRINTS Ankyrin repeat signature 124 138 IPR002110 GO:0005515
Spst2g01136 249 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Spst2g01136 249 MobiDBLite consensus disorder prediction 206 243 - -
Spst2g01136 249 MobiDBLite consensus disorder prediction 164 249 - -
Spst2g01136 249 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Spst2g01136 249 Pfam Ankyrin repeats (3 copies) 80 158 IPR002110 GO:0005515
Spst2g01136 249 Pfam Ankyrin repeats (3 copies) 13 70 IPR002110 GO:0005515
Spst2g01136 249 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Spst2g01136 249 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Spst2g01136 249 SUPERFAMILY Ankyrin repeat 13 155 IPR036770 -
Spst2g01136 249 Gene3D - 6 181 IPR036770 -
Spst2g01136 249 SMART ANK_2a 8 38 IPR002110 GO:0005515
Spst2g01136 249 SMART ANK_2a 42 71 IPR002110 GO:0005515
Spst2g01136 249 SMART ANK_2a 75 104 IPR002110 GO:0005515
Spst2g01136 249 SMART ANK_2a 108 137 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01136 11 152 Miscellaneous Gene Families AT5G02620 32.414 1.81e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01136 - - gmx:100812821 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01136 2 10053034 10054846 Spst2g01136 2 10053034 10054846 ECH