Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01115 ATGACGCGGGGAAAGCAGAAGATCGAAGCACAGAAGCGGAACGCAGAGAAGAATCAGAAGGCGAAGGGCTCTCAGATCGAGGCCAGAGCCGTTGGCCTCAAAGTTATCTGCCCCATCTGCAAGGTCCAACTTGCAAATCAAAACCAACTTGTTGATCACTATGGCTCCAAACATCCGAAGGAGAAACCCCCTGCAGAGTCAAGCTAG 207 0.5169 MTRGKQKIEAQKRNAEKNQKAKGSQIEARAVGLKVICPICKVQLANQNQLVDHYGSKHPKEKPPAESS 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01115 68 Gene3D - 1 66 IPR026939 -
Spst2g01115 68 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 63 IPR013087 -
Spst2g01115 68 Pfam Zinc-finger of C2H2 type 37 57 - -
Spst2g01115 68 SUPERFAMILY Expressed protein At2g23090/F21P24.15 1 65 - -
Spst2g01115 68 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Spst2g01115 68 MobiDBLite consensus disorder prediction 1 23 - -
Spst2g01115 68 PANTHER GEO09665P1-RELATED 1 66 IPR045230 -
Spst2g01115 68 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01115 - - gmx:100500226 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01115 2 9790234 9792710 Spst2g01115 2 9790234 9792710 ECH