Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01098 ATGGGTTTGCCAAGGTTTGGGCGTCCTAAGAATGATGGTGAATTGAGTTCGAATCTTTACGTGGCCAATTGTGGGTCCGCAGTGGGGATTTCTGATGATGACATTGCGTCTGTGTTCTGCAAATTTGGAGAGCTTAAGGGAGTTTATGCAGCAGATGAGAGTGGGACACGTGTCATAGTAGCTTATGCTGAAGAGGGTTCTGCGCAAGCTGCCTTAAAGGCATTACATGGACGCCCATGTCCTGAACTTGGAGGTCGATCCTTGCATATCCGTTATTCTGTGCTTCAGCCAACAACACAGGATCAAGCTAGTGACTTGGTTCCTGTATCTATCACAGCGTCAGATGTGAGCATTCCAGGCCTTTACCTAATGCATGACTTCATTAGTGCTAAAGAAGAAGAGGAACTGCTTCAGGCTGTTGACTGCAGGCCTTGGAATAGTCTTGCAAAAAGAAGGGTTCAACACTATGGTTATGAGTTTCGTTATGACATCAGGAACGTTAATACAAGGCATTGCTTAGGTGGACTTCCGTCATTTGTTTCTCCAATACTGGAAAGAATTTCATCATGTCCAACTTTCAAGAATGTTAAAAACATAGTTCTGGACCAACTTACGGTAAATGAGTACCCACCTGGAGTGGGCCTGTCCCCCCATGTAGACACTCACTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTATCAGGGCCCTGTATAATGGAGTTTAGGCGATATGAAAATGGTGATTGGCTTCCCAAAGTTGCCTCATGTGCTGTTGCAAAAATAGAAAATACAGAAGATCAATCAAATTTTTTAAGGAGAGCTATTTATCTTCCTCCTCGATCTTTGCTACTCTTGTCTGGAGAAGCACGTTATGCATGGCATCATTACATTCCACACCACAAGATAGATAAAGTTAATGGCAGAATCATTAGAAGGGCTTCAAGAAGGGTATCTTTTACATTTCGTAAGGTTAGAGCTGGTCACCAGATTTCAACAACCATAGCTTCGTTCAGTTATGTTCATCATCACTACAGCCCTAGCCTGTTACTAATGATGCGCATAACCTTCGCGAGACAGAACTCTGAAAATCTAGGCATGTGGCTTCAAATCCTGTTATCTTTCCTCTTGCCACTGGTTTCAACTTCCAAGACCCCAACATTTCCATTTCTACAAGATCGTCATTGGATTTTTTTCTCCTCTAATTGTGTGGAATTCTGCTTGAAATATATATATGCTATAACGACTAACTTGTGCAGTAGGGATAATGTGGGATATGTGGTTGAATGCATAGGATATGTACTTCTCTGA 1311 0.4211 MGLPRFGRPKNDGELSSNLYVANCGSAVGISDDDIASVFCKFGELKGVYAADESGTRVIVAYAEEGSAQAALKALHGRPCPELGGRSLHIRYSVLQPTTQDQASDLVPVSITASDVSIPGLYLMHDFISAKEEEELLQAVDCRPWNSLAKRRVQHYGYEFRYDIRNVNTRHCLGGLPSFVSPILERISSCPTFKNVKNIVLDQLTVNEYPPGVGLSPHVDTHSAFEDLIFSLSLSGPCIMEFRRYENGDWLPKVASCAVAKIENTEDQSNFLRRAIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGRIIRRASRRVSFTFRKVRAGHQISTTIASFSYVHHHYSPSLLLMMRITFARQNSENLGMWLQILLSFLLPLVSTSKTPTFPFLQDRHWIFFSSNCVEFCLKYIYAITTNLCSRDNVGYVVECIGYVLL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01098 436 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Spst2g01098 436 SUPERFAMILY RNA-binding domain, RBD 11 98 IPR035979 GO:0003676
Spst2g01098 436 Gene3D - 112 332 IPR037151 -
Spst2g01098 436 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 326 IPR005123 -
Spst2g01098 436 SMART rrm1_1 18 91 IPR000504 GO:0003723
Spst2g01098 436 SUPERFAMILY Clavaminate synthase-like 118 326 - -
Spst2g01098 436 Pfam 2OG-Fe(II) oxygenase superfamily 157 323 IPR027450 -
Spst2g01098 436 PANTHER OXYGENASE-RELATED 96 328 IPR032857 GO:0070988
Spst2g01098 436 FunFam ALKylated DNA repair protein AlkB homolog 114 329 - -
Spst2g01098 436 Gene3D - 7 108 IPR012677 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01098 K10770 - gmx:100777529 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01098 2 9668002 9672305 Spst2g01098 2 9668002 9672305 ECH