Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01071 ATGGAGAGTGAATTTGGCGCCAACGGTCCTTCAACTCCTCCGTCCAATTCCACGGAGTCCTTCATTGGCTGCTTCATAAGCTTGATTTCCAAGTGCGAGATTCGCTACGAGGGCGTTCTTTATTTCCTTAGCGTTCAGGATTCCACCATCGGCTTGAAAAACGTTAGATCTTATGGAACGGAGGGAAGAAGAAAAGATGGGACACAAGTTCCTCCTAGTGATAAGGTTTATGAATACATTCTTTTCCGAGGAAATGATATTAAGATCAAGTCACCCTCCACATCTTCTAAATCAGAAGAGCAGGGTTTTAGTGATCCAGCTATTATTCAGTCGCAATGTTCTGAGTCACCAAGTTCTCCTGTGGCCTCAGTTAATTTGACAGAACCAATTCAAAGGAAAGATACCCCAGCTATATCCAGTAAACCCGGTCCTGTTGGGTTGCCTTCTTATCAGTCTGTAACACACCTGGGACCTTCAAATTCATCTGCTGCTACTGAAGTTGATAGTCATCCATCTTTTTCTTCGGCAATGTATAGGCAGGGACCTAGTGATATGTCTAGCAGTAGTTCTCATTCTCTGCTACAATCTAATTCCCTTTATCCCCCATCAATGGCAGCATCCTTAGCCATGCAGAATCTGATGAAAAATGCAGAAACTCAGTTACCTACAAAAGGGGGATGGACAGGTTTTTCAGAGTGTGGTCAACCTGTATCCTCTGCCATGACTTCTTCTCTTCATCTGACTCATTCACCTTCTCTTACCTCTAAAACAAATTCCGATTCTCTTGATGTTCCATCCCTTTTGTCTACTAAGATACCTGTGCCATATTCTGCATCCTTGACTTTTGATGGATCAAACATGCCTCAGTTTTCTTCACCTTTTCAAGACATAAATTCGTTTGGAGCTCAAATATCTGGAAACATCTGTCCTGACCCAAGGCCAATTCATCCTCAACATTCTGCCCCTTCATTTGTAGATTCTACTTTAGGTCCCTTGCCAATGGCACCACCCTCTTTGTTAACTCCAGATCAATTTGCAAATCCTAGGGAAAGGTTATTATCCATTAAACATAATTTGAACCCTATTCAGAAGGATATGGGTTCTCTGAGTCTAACAACCTCTGGTTCCTCTGCATTAATGCCCTTCCCTGCATCTCAGGCACCACTGCTTCCGCTACCTACTTCAGTGCAAAAGCCTCGATACACAGCTCCACAATTCACTGAAGAGTTTGATTTTGAGGCCATGAATGAAAAGTTCAGAAAGGATGAAGTATGGGATTCTCTTGGAAAGGCAACCGCAAAAATAGAGGGAATGGAGGATATTACTTCTCTCAATTTGGGTGACACACAATATCATGAGATGATAACAAACCATAAGTCAGCATACAAAAAAGATGACTTTTTTGACACAATTTCTTGTAACTCTTTGACCCGTGGATCAAGGAATGGACAAAATCGTTTCTCTGAGAGAATGAAACAGGATACCGAGACATTTGGCAATTTCCAGCAGAGGCATCATTTTAGTTATGGTGCTTCTGGACGGGGTGAGAATTTCAGGGGCTCGTATAATTGGGGAGGAAGGGGTTATGGCTATAGTGGGAGAGGGCGTGGTCCAAACTTTCCTCTCTAG 1629 0.4279 MESEFGANGPSTPPSNSTESFIGCFISLISKCEIRYEGVLYFLSVQDSTIGLKNVRSYGTEGRRKDGTQVPPSDKVYEYILFRGNDIKIKSPSTSSKSEEQGFSDPAIIQSQCSESPSSPVASVNLTEPIQRKDTPAISSKPGPVGLPSYQSVTHLGPSNSSAATEVDSHPSFSSAMYRQGPSDMSSSSSHSLLQSNSLYPPSMAASLAMQNLMKNAETQLPTKGGWTGFSECGQPVSSAMTSSLHLTHSPSLTSKTNSDSLDVPSLLSTKIPVPYSASLTFDGSNMPQFSSPFQDINSFGAQISGNICPDPRPIHPQHSAPSFVDSTLGPLPMAPPSLLTPDQFANPRERLLSIKHNLNPIQKDMGSLSLTTSGSSALMPFPASQAPLLPLPTSVQKPRYTAPQFTEEFDFEAMNEKFRKDEVWDSLGKATAKIEGMEDITSLNLGDTQYHEMITNHKSAYKKDDFFDTISCNSLTRGSRNGQNRFSERMKQDTETFGNFQQRHHFSYGASGRGENFRGSYNWGGRGYGYSGRGRGPNFPL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01071 542 MobiDBLite consensus disorder prediction 110 134 - -
Spst2g01071 542 ProSiteProfiles Sm domain profile. 13 96 IPR047575 GO:0003723
Spst2g01071 542 ProSiteProfiles FFD box profile. 460 475 IPR025761 -
Spst2g01071 542 PANTHER SCD6 PROTEIN-RELATED 16 537 - -
Spst2g01071 542 CDD LSm14_N 18 88 IPR025609 -
Spst2g01071 542 ProSiteProfiles TFG box profile. 482 502 IPR025768 -
Spst2g01071 542 MobiDBLite consensus disorder prediction 152 195 - -
Spst2g01071 542 MobiDBLite consensus disorder prediction 110 195 - -
Spst2g01071 542 Pfam Scd6-like Sm domain 21 88 IPR025609 -
Spst2g01071 542 ProSiteProfiles DFDF domain profile. 398 434 IPR025762 -
Spst2g01071 542 Gene3D - 13 93 - -
Spst2g01071 542 SMART FDF_2 404 502 IPR019050 -
Spst2g01071 542 Pfam FDF domain 405 500 IPR019050 -
Spst2g01071 542 SMART LSM14_2 15 113 IPR025609 -
Spst2g01071 542 SUPERFAMILY Sm-like ribonucleoproteins 20 88 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01071 Spst-Chr2 9444937 9450228 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01071 K18749 - gmx:102669894 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01071 2 9444937 9450228 Spst2g01071 2 9444937 9450228 ECH