Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01055 ATGACGCTAACTAGGGTTTTCGGTGTGGCCGTGGGCAGGGCCTTCATGGCGGCGGCGGCGAAGAGTGCGGCCAAGGCGAAAGCTGTTCCGTCCGGCGGAGCCACGTCAAAGCCCGCGGTTAAGAAGACGGCAGTAACCAGAGGTAACAGCGGCATACAGAAGGCGGTTCCGGTCTCTTCCGAGCTTGGCAACTTTCTAGGGTCTTCTGAAGTGTCGCGAACTGTCGCTGTTAAAAAAGTGTGGGAGTACATCAAGCAGCAGAATCTTCAGAATCCTTCAAATAAGAAGGAGGTCTTTTGTGATGCAAAGTTGAAGACCATTTTTGGTGGGAAAGATAAGGTTGGGTTCACAGATATTGATACATTGCTGTCTAACCATTTTGTGAAATCAGCCTGA 396 0.5076 MTLTRVFGVAVGRAFMAAAAKSAAKAKAVPSGGATSKPAVKKTAVTRGNSGIQKAVPVSSELGNFLGSSEVSRTVAVKKVWEYIKQQNLQNPSNKKEVFCDAKLKTIFGGKDKVGFTDIDTLLSNHFVKSA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01055 131 CDD SWIB-MDM2_like 56 127 - -
Spst2g01055 131 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 28 128 - -
Spst2g01055 131 SMART swib_2 52 131 IPR019835 -
Spst2g01055 131 Gene3D SWIB/MDM2 domain 46 131 IPR036885 -
Spst2g01055 131 ProSiteProfiles SWIB/MDM2 domain profile. 51 129 IPR003121 -
Spst2g01055 131 Pfam SWIB/MDM2 domain 55 127 IPR003121 -
Spst2g01055 131 SUPERFAMILY SWIB/MDM2 domain 46 129 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01055 Spst-Chr2 9269725 9271088 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Spst2g01055 SWIB 2.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01055 - - gmx:100779127 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01055 2 9269725 9271088 Spst2g01055 2 9269725 9271088 ECH