Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01047 ATGGTCCCCAAACCCATCATAGTCACAGCACCACCGGTGTCTTCTCCACCCAACCCTCTCCTAAAAAACGCAGTATCAACAGTCAAAACAGAAGAAAAACCCACTCCCACCACTCCAAAAACCAACCCAGTCCCATCCATCAAAACGACGCCGCAGCAGCGCGTGGAAATAAAAAGGAAAACCAATTCATGGGTTCCAACGCTAATGCTCAACGCGTTCGACAACATCATCAACAACTTCATAGACCCTCCGCTCAAACCCTCCGTAGACCCCAGACACGTCCTGTCGCAAAACTTCGCCCCCGTCGACGAACTCCCTCCGACCGAGTGCGAGGTCGTCGAGGGCTCCCTCCCACCATGCCTCGACGGCGCGTACATCCGAAACGGCCCCAACCCCCAGTTCCTCCCGCGTGGGCCCTACCACCTCTTCGACGGCGACGGCATGCTCCACGCGCTCCGCATCTCCCAAGGCAAACCCACCCTCTGCAGCCGCTACGTCAAAACCTATAAATACACAATGGAAAACGACGCCGGTTTCCCTCTCATCCCCAACGTCTTCTCCGGCTTCAACTCCCTCGCGGCCTCCGCGGCGCGGGGCTCTCTCACTGCGGCGAGGGTCTTCACGGGACAGTTCGATCCCTCTAATGGAATTGGGTTGGCCAACACCAGCTTAGCCTTCTTCGGTAACCGTCTCTTTGCGCTAGGCGAATCCGACCTCCCCTACGCCGTCAACGTTACCCCTAACGGCGATGTCGAAACAATCGGCCGTTACGACTTTAATGGCAAACTTACCTTCAGCATGACGGCGCATCCGAAGATAGACCCCAACACAGGGGAATGCTTTGCCTTTCGTTACGGCCCCGTTCCCCCATTTCTCACCTATTTCCGTTTTGATCCTAACGGTAACAAATACGACGACGTGCCCGTTTTCTCGATGGTATCACCTTCGTTCCTCCACGACTTCGCCATCACCAAGAACTATGCAATCTTCTGCGACATTCAGCTCGGAATGAACCCTCTCGACATCATCGCCGGTGGCTCCCCCGTCGGCTCCGTCGCTTCCAAGGTCCCAAGGATTGGAATCCTTCCTCGTGATGCTAAGGATGAATCGATGATGAAGTGGTTCGAGGTGCCGGGGTTTAACATCATTCACGCAATAAACGCGTGGGAGGAGGACGAGGGAAGAACGGTGGTGCTTGTGGCGCCGAATATTCTGTCGGTGGAGCATGTAATGGAGAGAATGGAGCTGATTCACGCGATGGTGGAGAAGGTGAGGATCGATCTGGAGACGGGGATTGTGACGCGGCAACCGGTGTCGGCGCGGAACCTTGATTTCGGGGTTATAAACCCTGCGTTCGTTGGGAAGAAGAACAGTTTTGTTTACGCGGCGGTGGGAGATCCCATGCCGAAGATCTCGGGGGTGGTGAAGCTGGACGTGTCGAAGGGGGATGAGCGGAGGGACTGTACGGTGGGTTGCCGGATGTTTGGCGAGGGGTGCTACGGCGGGGAACCCTTCTTCGTGGCGAAAGAGGAAGGGGGCGAGGAGGACGATGGGTACTTGGTGACGTACGTGCACGACGAGAGGAAGGGAGAATCGAGGTTCTTGGTGATGGACGCGAAATCGCCGGAGTTGGACGTGGTGGCGGCGGTGAGGCTCCCGCGGCGGGTTCCGTACGGCTTTCATGGATTGTTTGTGAAGGAAAGTAAGCTGAGGAAGGTGGTGTCGTTGTAG 1731 0.565 MVPKPIIVTAPPVSSPPNPLLKNAVSTVKTEEKPTPTTPKTNPVPSIKTTPQQRVEIKRKTNSWVPTLMLNAFDNIINNFIDPPLKPSVDPRHVLSQNFAPVDELPPTECEVVEGSLPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISQGKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLAASAARGSLTAARVFTGQFDPSNGIGLANTSLAFFGNRLFALGESDLPYAVNVTPNGDVETIGRYDFNGKLTFSMTAHPKIDPNTGECFAFRYGPVPPFLTYFRFDPNGNKYDDVPVFSMVSPSFLHDFAITKNYAIFCDIQLGMNPLDIIAGGSPVGSVASKVPRIGILPRDAKDESMMKWFEVPGFNIIHAINAWEEDEGRTVVLVAPNILSVEHVMERMELIHAMVEKVRIDLETGIVTRQPVSARNLDFGVINPAFVGKKNSFVYAAVGDPMPKISGVVKLDVSKGDERRDCTVGCRMFGEGCYGGEPFFVAKEEGGEEDDGYLVTYVHDERKGESRFLVMDAKSPELDVVAAVRLPRRVPYGFHGLFVKESKLRKVVSL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01047 576 MobiDBLite consensus disorder prediction 25 51 - -
Spst2g01047 576 MobiDBLite consensus disorder prediction 1 18 - -
Spst2g01047 576 MobiDBLite consensus disorder prediction 1 20 - -
Spst2g01047 576 PANTHER BETA-CAROTENE DIOXYGENASE 102 566 IPR004294 GO:0016702
Spst2g01047 576 Pfam Retinal pigment epithelial membrane protein 101 566 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01047 Spst-Chr2 9159016 9160995 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01047 K09840 - gmx:100777875 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01047 2 9159016 9160995 Spst2g01047 2 9159016 9160995 ECH