Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01025 ATGGCCAACCGGCCAAGCCTCAACTTTATTGTTGCTCTTATAAACTTTGAGCAGTACAAGTTCTACATTTTACCTCCTGCTATAGCTTCAACATCTACCCCAGTCAATGTTGCATATGATATAGATAATACAGGCTCTGTAGATACTCGTCCAAGGGATTGTGAATCAGATACTTCCTTGGCAGGTTCGCACTTAGAGGAATGTCATGGACCAAATACAGTTGAACATCTTATGTTTCCTCGAGCTGAAGAATCTTGCAATGAATTTCAATCTAAAGTCCCTATGAAAAATTTCATACGGGCAGACCCAAGTTACCTTAAAACTCTTGGCCAGGCTCATTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAACTCCAAGGATGCCAAAGCAGCTAAAATGGACATTTTTGTAGATATCATCCAGTTGAAGAAATCTCGGAAGGATATCCCCATGCTGTCTGTTATTGATGACGGTCAAGGGATGAACCATGATGAGGTTATGAAAATGGTATCTTTTGGACACAAGCAATCTGATAAAGTTGACAAGGATCACATTGGCAAATTTGGTGTTGGATTCAAAACGGGAGCAATGAGACTTGGGAGAGATGTTCTGGTTCTAACACAGACAACTAATTCCAGATCACTAGCTTTTCTTTCACAATCATTGAATGAAGGCAAAGATAATATTGAAATTCCAATAGTTAGCTATTGTCGACAAGGACAACGAATGGAAGTTGACCTAAGTGTGCAGTCTGAAGCTTTGGCAAAACACAATTTGAAAGCTATTAAGGATTTTTCACCATTTAACAAGTATCTTATTGGTGAAAAGGCAGCCTTGTTTGGTACTGGTACAGGAACACAAATATACATATGGAACTTGGATGAATGGGGATCAAAGTATTGTTTAGAATGGCATGATGGATTGAAAGGTGGGAGTTCTTTTCACCAAGGTGACATTGTTATCCACAACAAAAGGACTCGTTCTCGTCCAGGCCAGATCAGTCAAAAGGTTCCATTGGATTACTCATTACGAGCTTATTTAGAAATTATATTCTTAGTTCCTCGAATGAAGATTAGTGTACAAAGGACATTGGTTAAAACTCGACCATTATCAAAATTCCTGACTCAAACTGTTATTGAAACTGGTGACATCTTGATGAGGCCCGTTGAATTAATTCTTGGATTTAGTCAATTAGAGTGGGAGCGGGCAAATTGTGGAATGTTTTTGTATTGGCATGGTCGCTTAATTGAGGCCTACAAAAGAGTTGGTGGAATGATTCATAGTGCAGATGTTGGCCGTGGTGTAATTGGTGTTATAGATGTTACGAATTTAATGGATGATAAGGATGGTCGGGTTTGGGTACATAATAACAAGCAGGGATTTCAAGACTCAGAACAATATGCATGTCTCGAGCGGTGGCTGGGTAGAAAAGCAGATGAATACTGGGACAACAATTTTGACTCACTTAAATTGGACAAAGATAATTGTGTATTGAAACCTGATCATGAGTGGGTTCAATGTGACAAGTGCAGAAAGTGGAGAATATTACCTACTGGTTTTAATAGCAGCAAATTACCCGTGCAATGGTTTTGTTTCATGGAGCCTTTCAAAGGTCAATGTGCAGATCCTGAACTGAAGATGGAGTTTGGCATGGTTAATGTTTCCACAAAGAGGTCAGGTTATGGTTGCTTGTCGAAGGATTCAAACGATGAAAAAATGGAGAGTGTTATGAAAACTTCTGGCACAGGTTAG 1761 0.3935 MANRPSLNFIVALINFEQYKFYILPPAIASTSTPVNVAYDIDNTGSVDTRPRDCESDTSLAGSHLEECHGPNTVEHLMFPRAEESCNEFQSKVPMKNFIRADPSYLKTLGQAHSGWIFGGIAELVDNSKDAKAAKMDIFVDIIQLKKSRKDIPMLSVIDDGQGMNHDEVMKMVSFGHKQSDKVDKDHIGKFGVGFKTGAMRLGRDVLVLTQTTNSRSLAFLSQSLNEGKDNIEIPIVSYCRQGQRMEVDLSVQSEALAKHNLKAIKDFSPFNKYLIGEKAALFGTGTGTQIYIWNLDEWGSKYCLEWHDGLKGGSSFHQGDIVIHNKRTRSRPGQISQKVPLDYSLRAYLEIIFLVPRMKISVQRTLVKTRPLSKFLTQTVIETGDILMRPVELILGFSQLEWERANCGMFLYWHGRLIEAYKRVGGMIHSADVGRGVIGVIDVTNLMDDKDGRVWVHNNKQGFQDSEQYACLERWLGRKADEYWDNNFDSLKLDKDNCVLKPDHEWVQCDKCRKWRILPTGFNSSKLPVQWFCFMEPFKGQCADPELKMEFGMVNVSTKRSGYGCLSKDSNDEKMESVMKTSGTG 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01025 586 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 109 281 IPR036890 -
Spst2g01025 586 Gene3D - 494 551 - -
Spst2g01025 586 Pfam CW-type Zinc Finger 506 547 IPR011124 GO:0008270
Spst2g01025 586 Gene3D - 87 275 IPR036890 -
Spst2g01025 586 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 86 512 IPR045261 GO:0016887
Spst2g01025 586 ProSiteProfiles Zinc finger CW-type profile. 501 551 IPR011124 GO:0008270
Spst2g01025 586 Pfam Morc6 ribosomal protein S5 domain 2-like 344 485 IPR041006 -
Spst2g01025 586 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 121 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01025 Spst-Chr2 8909393 8915301 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01025 - - vra:106777695 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01025 2 8909393 8915301 Spst2g01025 2 8909393 8915301 ECH