Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00998 ATGAGCGAATCGCAAGAGCCCTCCTACCCTCCCATTGACCCCGTCAACTTCGATCTTATCATCGTCGGCACCGGCCTATCAGAATCCGTCATCGCTGCGGCTGCATCCGCCGCCGGCAAAACCATCCTCCACCTCGACCCCAACTTCTTCTATGGGAGCCACTTCGCCTCTCTCTCCTTTCTCGACCTCACTACCTACCTCACTTCCCCCAACCCTCTCCCCGCCGCCGTCACAACCACCGACTCCGACGACGTCGTTGTCGACCTCCTTCACCAACCCCTCTGCTCCAACGTGGAAATCGTGTCCTATGATGAATCCTCGTTCCTCCTCGAAAATTCGAGAAAATTCAACATCGATTTGGGAGGTCCTAGGGCGCTGTTCAGCGCGGACAAGACGATCGATCTGCTACTGAAATCGGGCGCAGCGCAGTATTTGGAGTTCAAAGGAATCGATGAAAGCTTCGTGTACGAAGCGAATGGGGGTTTGGCGAACGTGCCGGATTCTCGCGGAGCGATTTTCAGAGACAAGAAGCTTTCACTCAAGGAGAAGAACCAGTTAATGAGGTTCTTCAAGCTGGTGCAACAGCACTTGGATGATACTCAGGAGGAGAAAATTTCGGAGGAGGATCTGGAGATTCCATTTGTTAGTTTCTTGGAGAAAATGAATTTACCGCCGAAGATAAAATCGATTCTTTTGTATGCTATAGCCATGGTAGATTATGATCAAGACAATCACGAGATTTCTAAAGATTTGCTTAAAACAAAAGATGGAATAGATTGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCTAATGCCCCTGGGGCTATGCTTTATCCTATTTATGGTGAAGGAGAACTACCACAAGCCTTTTGTCGCCGAGCCGCTGTCAAAGGCTGCATTTATGTGGTTTATTCTTATCAGTATGATAGAAGGAAACATGGTTCAGGTATCATGTTGTCGAGGACATTGGCATGTTTGGCTTTTCCTAGAGCTTTCTTTCTGAATGCCAGGATTGTAGCTGTGGGGATGGATTCAAATTTTGCTATAAGGATACTTGATTACACTATTGTTCTAAGAATGCCAGTTGTTTCTCTGCTTATGGATAAGTACTTTGTTGTGAGAAAAGATGCGGTTGAAGTCAAGTGCAAAAGGAATTTCATCTTTGTCATTTTTAAACCAACAATGCAGGTTACTGGGCTTTATAAAGGTGTTAGATTAGCTTCAAGTCAGGATTTATATAGCCACCAATTAATCCTGGACCCATCCCTCACAATTCCATCATCGTTGTCTCTGTCTCCAAGAGATTATCCCAGTGAAAGGCTCCAAATGTTGAGTCAGAGAGATATTAAAGGAATAGTGGCCAGGGGAATATGCATCACAAGAAGTTCAATAAAGCCAGATGTATCTAATTGCTCAGTGGTGTATCCTCCTAGATCTTTGTATCCAGAACAGGTGACATCAATCAAAGCTCTGCAGATAGGATCAAATCTTGCTGCTTGTCCTGCGGGAACCTTTATTTTATATTTTTCCACTTTGTGCAATGATGCCAATGAAGGAAAGAATCTACTAAAGGCCGCCATGAATGCTCTTCTCACATTGCCTGTATCCAGAAACACTGAAAGTATTTCAAGTGTTCAAAGTGACAGTGAAGATACTAAACCGATTGTGCTGTGGAGTGCGTTGTATATTCAGAAATTAATTACGAGTAAATTTGAATTTATCAGCTCCACTTCTACACCAGATGGAAATCTGAACTACAATGACCTTTTAGATGCGGCTGAGAAGCTATTTGGACAGATGTACCCCAATGAAGAATTCTTTCCAAAGGTAACATCACCCGAAGATCCTACGGATGGGGATGATAATGGGTTAACTCTGGATAGCTAA 1893 0.4411 MSESQEPSYPPIDPVNFDLIIVGTGLSESVIAAAASAAGKTILHLDPNFFYGSHFASLSFLDLTTYLTSPNPLPAAVTTTDSDDVVVDLLHQPLCSNVEIVSYDESSFLLENSRKFNIDLGGPRALFSADKTIDLLLKSGAAQYLEFKGIDESFVYEANGGLANVPDSRGAIFRDKKLSLKEKNQLMRFFKLVQQHLDDTQEEKISEEDLEIPFVSFLEKMNLPPKIKSILLYAIAMVDYDQDNHEISKDLLKTKDGIDCLAQYSSSVGRFPNAPGAMLYPIYGEGELPQAFCRRAAVKGCIYVVYSYQYDRRKHGSGIMLSRTLACLAFPRAFFLNARIVAVGMDSNFAIRILDYTIVLRMPVVSLLMDKYFVVRKDAVEVKCKRNFIFVIFKPTMQVTGLYKGVRLASSQDLYSHQLILDPSLTIPSSLSLSPRDYPSERLQMLSQRDIKGIVARGICITRSSIKPDVSNCSVVYPPRSLYPEQVTSIKALQIGSNLAACPAGTFILYFSTLCNDANEGKNLLKAAMNALLTLPVSRNTESISSVQSDSEDTKPIVLWSALYIQKLITSKFEFISSTSTPDGNLNYNDLLDAAEKLFGQMYPNEEFFPKVTSPEDPTDGDDNGLTLDS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00998 630 Gene3D - 13 111 IPR036188 -
Spst2g00998 630 PIRSF Rab_ger_ger_transf_A_euk 91 308 IPR001738 GO:0005968|GO:0006886|GO:0018344
Spst2g00998 630 PIRSF Rab_ger_ger_transf_A_euk 395 629 IPR001738 GO:0005968|GO:0006886|GO:0018344
Spst2g00998 630 PIRSF Rab_ger_ger_transf_A_euk 1 83 IPR001738 GO:0005968|GO:0006886|GO:0018344
Spst2g00998 630 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 165 275 - -
Spst2g00998 630 FunFam Rab proteins geranylgeranyltransferase component 165 277 - -
Spst2g00998 630 Pfam GDP dissociation inhibitor 110 305 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 Pfam GDP dissociation inhibitor 16 101 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 SUPERFAMILY FAD-linked reductases, C-terminal domain 452 570 - -
Spst2g00998 630 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 441 567 - -
Spst2g00998 630 MobiDBLite consensus disorder prediction 608 630 - -
Spst2g00998 630 PRINTS Rab GDI/REP protein family signature 36 53 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 PRINTS Rab GDI/REP protein family signature 132 148 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 PRINTS Rab GDI/REP protein family signature 182 197 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 PRINTS Rab GDI/REP protein family signature 18 36 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 PRINTS Rab GDI/REP protein family signature 284 305 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 PANTHER RAB GDP-DISSOCIATION INHIBITOR 13 612 IPR018203 GO:0005092|GO:0007264
Spst2g00998 630 SUPERFAMILY FAD/NAD(P)-binding domain 15 304 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00998 Spst-Chr2 8592533 8598182 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00998 K23460 - gmx:100795946 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00998 2 8592533 8598182 Spst2g00998 2 8592533 8598182 ECH