Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00983 ATGATGGACACTCACGCAGAAGATTCTGTTAGATCCGAGGAGCATTTGCCTGATGAGGATCATCATACCGAAGATGGAAGCAATGGAAATCTTCTATTGGAAAATGGATTGTCTGATGGCAATCAAGGTCCTGCTGAGACTCACGATCAGCTTCTACAAATGGTTATGGACCTCAGGTTTCAGAATGACTACTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAAACAGTGTAAATAGTGATTCTAGCATACAGAAAGGAGTTGGTGGATTGGAAGATGCGGATTCTGACTTTGTTAAAGAACTAAAGGAAAAGATACAAGTATTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCAGAGGAGGCTTTGAAGCATCTTCAAATGGCATACTCAGAGGCAGAAGCAAAGGGTCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACAAAGTTGGACCAAGAAATAAAAGAGCGCGATGAAAAGTACTCTGAACTTGACTCCAAGTTTAACAGGCTTCACAAGCGAGCAAAACAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATCTTGAAGCCCGTTTCTCTGAGGTAAATGAAATTGCCGAGCGAGCATCATCTCAACAGTCAGCAATGCAACAAGAATTAGAGCGGACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGGCGTTCATTGCAACCTAAAGAGAGTGCTCTTGAGGTATTGCAACAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAGAGGCAAGCTTCACTGGTTGAGGTCTCAGCTAAACATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCATTTTCAGACAGAAATAAGGCAACTGAATCCATTGCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACTGGGGAAGCAGCACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGAGAGCTGTCTCACCTAAAAGAGGAGCATGAAAAAGAAAGGGCAAGCTGGGAGACTGCTTCGCAGGCACTTAAAGCAAAACTCGACATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCCAAAATAAGAAGTCAGCTGGAATCAGAGGTATCCGCAAAAACAAGGATCCTTAATATGAGAGATGTGGAATTGTCGGCTGCCAAGAAAGAGATCAGCTCTCTAGAGAAGGAGTTTTCTTCATACAAAGTTCGAGCACATGCACTTCTTCAAAAGAAGGATGCTGAACTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTCTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAAAGTTCTTCAAGATCTTCAATCTGCCATGGCCAATCATGAGAAAGAACTTGCAGAAAGAGACACAGCCCTTGCAAATGTCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGTTAATGCTCAGCACCTAAGAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAAATTCGAGGCAATGAAGGCTGAAAATGAAGCAATTGCTACAAAAGATAAGCAAAAGGAATTGGAAGAGCTCAAACAGCAATGTAAAAAACTGAAGGATGAGCATGCTTCATTTCAGAATCTTGCTGATAGAATGATTGAGGAGAAAGACTATGAAATATCCAGACTTTTAGATGAAAATAAGAATCTTCGGCAGTCTATTCAATCAAGACCATCAGTCGATCAAAATGATAATTATACAACAGCCTTGCATAAATCGGATTCAACAAATTTGAGCCCCTCAGCTGCAGAACAGCAAATTTTGCTTTTGGCTAGACAACAAGCACAGAGAGAGGAAGAGCTAGCACAGTCTCAACGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGCGAGAATCGTCTCCATAGCCAACAGGAGACAATGTTAAAGACTGAACTTCGCAACATGGAAAGATCAAAGAAAAGGGAAGGAGTAGATATGACGTATTTGAAGAATGTTATCTTAAAACTGCTCGAGACCGGTGAAGTTGAGGTATTGCTACCAGTTATTGGAATGCTGCTTCAATTTAGTCCAGAAGAGATGCAGAAGTGCCAACAGGCATATCGCAACTCAACAGAAGTTCCACCAACTCCTGGAAGTGATACTTCAGGATCTGGCCTATCACTTTTCTCAAGATTCACATTTTCTTAA 2379 0.4082 MMDTHAEDSVRSEEHLPDEDHHTEDGSNGNLLLENGLSDGNQGPAETHDQLLQMVMDLRFQNDYLKSQFEGFKNVNSVNSDSSIQKGVGGLEDADSDFVKELKEKIQVLNKEFLEEKQTRIASEEALKHLQMAYSEAEAKGQELSEKLAEAQTKLDQEIKERDEKYSELDSKFNRLHKRAKQRIQEIQKEKDDLEARFSEVNEIAERASSQQSAMQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLRRSLQPKESALEVLQQSLAEKEQMLEDMRGLLQAAEEKRQASLVEVSAKHQKNIESLEAQLNDAFSDRNKATESIASLQVLVAEKESRIAEMEAASTGEAARLRAAVESVKGELSHLKEEHEKERASWETASQALKAKLDIAESNCIRAEVEVAKIRSQLESEVSAKTRILNMRDVELSAAKKEISSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKALEETLKEVENEVLSITEERDKVLQDLQSAMANHEKELAERDTALANVKQQIRSLEIKLDSVNAQHLREKEEWGLSLQNVEETWRIKFEAMKAENEAIATKDKQKELEELKQQCKKLKDEHASFQNLADRMIEEKDYEISRLLDENKNLRQSIQSRPSVDQNDNYTTALHKSDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQETMLKTELRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEMQKCQQAYRNSTEVPPTPGSDTSGSGLSLFSRFTFS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00983 792 Coils Coil 354 413 - -
Spst2g00983 792 Coils Coil 564 626 - -
Spst2g00983 792 SMART 1grip 719 763 IPR000237 -
Spst2g00983 792 MobiDBLite consensus disorder prediction 626 651 - -
Spst2g00983 792 Coils Coil 127 168 - -
Spst2g00983 792 MobiDBLite consensus disorder prediction 1 27 - -
Spst2g00983 792 Coils Coil 459 546 - -
Spst2g00983 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 76 778 - -
Spst2g00983 792 Coils Coil 425 452 - -
Spst2g00983 792 Coils Coil 667 708 - -
Spst2g00983 792 Coils Coil 177 257 - -
Spst2g00983 792 Coils Coil 99 119 - -
Spst2g00983 792 Coils Coil 301 349 - -
Spst2g00983 792 MobiDBLite consensus disorder prediction 28 45 - -
Spst2g00983 792 MobiDBLite consensus disorder prediction 1 45 - -
Spst2g00983 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Spst2g00983 792 Pfam GRIP domain 720 759 IPR000237 -
Spst2g00983 792 Gene3D - 217 397 - -
Spst2g00983 792 Coils Coil 265 295 - -
Spst2g00983 792 MobiDBLite consensus disorder prediction 762 782 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00983 - - gmx:100775990 1312.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00983 2 8432506 8443510 Spst2g00983 2 8432506 8443510 ECH