Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00922 ATGGACCGCCGGGGTTGGCCCTGGAAGAAGAAATCATCTGATAAAAGCATAAAGGTTGAGAATGAGAAACCTGCGTCTGCTTGTGAATCTGGTGTTTCTATATTGTCTTCTGTGGCACATGTAGGAGATCAGCAAGAGAACAGCAAACATAAGAACTATGTTCAAATATCAATGGAGTCATATACTCGTATGTCTGGATTGGAAGATCAAGTTGTAAACTTAGAGGATCAACTAAAAGCTTTGGAAGCAAAGCTATCTTCAGTTTATTCGGAATTAGATAACAAGGATAATCTAGTTAAACAGCATGCAAAAGTTGCAGAGGAGGCAGTCTCAGGTTGGGAGAAAGCTGATTCAGAAGTTGTTTCCCTGAGACGTCAACTTGAATCTGTGTCTCTCTCTAAGCTTAATGTTGATGAGAAAACAGCTCACCTAGAAGAAGCTTTAAAAGGGTGCATGAAGCAGATAAGAACTGTAAAGGAAGAAAGTGAGCATAAACTGCATGAGGTGATTCTTATGAAATCTCATCAATGGGAGAAAATCAAGTTAGAACTTGAAGCTCAAATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAGTGAAAATGCTGCCCTTAGAAGATCACTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGCTGAGGGACAGGTAGAGCTTCTAACGAAGAGTTTTCAGTCAAAAGAAAAAGAAATATCTTCTTTGAAGTATGAGCTGCATGTAATTTCTAAGGAGCTGGATATCCGAAACGAAGAGAAGAGTATGATTATGAGATCAGCAGAGGTGGCAAACAAGCAACACACAGAGGATGTCAAGAACATTGCCAAGCTAGAGAGTGAGTGCCAACGACTTCGTGGTCTGTTGAGAAAGAAGTTACCAGGGGCTGCTGCATTGGCACAGATGAAACTAGAAGTTGAGAGTTCACATCATGTCATCAGTGCATTCCATCAAAGAAAAGCTACTTCAAAAAGTGATAGCCTGCAAGAATCTGAGTTTCTTTCCAAGCAATTAGAGGTGTTGGAAGAAGAAACAAGGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTTCAGGCTTCTAAAAACTTGTATGCTAAAACAGCTGGCAGACTTAAGCGCTTGGAAGCAGAGATAAATCAAGAAAGAAGCACCCAGAAATCAATTTTGGCAACCAATTATGGAAACTCCTTTAGAAGAATTTACAGCTATTCATCGAGCATTACTTCTATCTCAGATAATGGGCATGAGGATCCTGAAAGTCCCGTTGAGTCTTGTGCAGCATCAATTCTTGACCATTCTGATATCAGGAGGATTGGAAGTGTTGGTAAGTTTGAGAATCATAGGAGTGAAACTATCTCAGACCTGATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGAGAATGGTGATGCACCTCTTGGCATTATTAGTAAAACTATTCATACTGCCGAAGGTATGAAGGCTCGTTGTTTATCTTCAAATCAAAGTTGTTTTGACACGACAAACCAAAATATAGAACCTGAGCCTAAAAGTGAATGCACTGATAAGACAGCTGAACGTGATGAGCATATGCAAGATCTTATGGAAAAAAAGCTGATGTTGCGGGAAAACATGCAGCTTCTAGAAGAGCTGAAAGCACAACTTGAGTCGTCCCATAAATCATGTAGTTTAACTGAGATTCAGCTGAAATGTATGACTGAGTCTTACAAATCACTTCAAACTCGTGTAGAGGAGCTAGAGACTGAAAATACGTATTTACAGGAAAAGATAAATGAGCTAAAGAATGACCTTGCAGAGGAAAAACGAAGTCATCATGATGCTTTGGTGAGATACAATGAAATTGAAGAGAAAATGCGAAGGGACAAGTGCTTGGTGTGTGCATCAAATTCGGCAGCAAACTCTGTGAAGGGAACTGCTTTTGCATTTCTAAATTCTATCGAATTGGTATTTGAAGTAATGTGGGATAAAGAGCTAGCAGCTGCGGAGAAAAAGCTGGCAGAATGTCAGGAGACTCTGTCTATACTTGGTAGACAATTGCAAGCCATGTGCCCCCAGATAGGTGTGACCACGACTCAGCATAGCAAAAGGCTTCAAGTGAATGAAAAGTTAGCCAAACCAACTTATGGCTGGTCAAATTCTTATGGGTCATGTAACTCAAATGAAATTGATCATGCTGAGGCATGTAGCGTAGTGTCTGACATTCAAGGAGTGGTTGATGAGTTTTCATCGCATAACTCTGGTGCCACATCACGCCTTTCAGACACCGAAGGCAACTTTTGGTTAAACTCTGAAGCAGGTTCAAATCACTAG 2358 0.4029 MDRRGWPWKKKSSDKSIKVENEKPASACESGVSILSSVAHVGDQQENSKHKNYVQISMESYTRMSGLEDQVVNLEDQLKALEAKLSSVYSELDNKDNLVKQHAKVAEEAVSGWEKADSEVVSLRRQLESVSLSKLNVDEKTAHLEEALKGCMKQIRTVKEESEHKLHEVILMKSHQWEKIKLELEAQIDNLDEGLRELASENAALRRSLQESSNKIVKLKEEKSEAEGQVELLTKSFQSKEKEISSLKYELHVISKELDIRNEEKSMIMRSAEVANKQHTEDVKNIAKLESECQRLRGLLRKKLPGAAALAQMKLEVESSHHVISAFHQRKATSKSDSLQESEFLSKQLEVLEEETRTLKEALASSNAELQASKNLYAKTAGRLKRLEAEINQERSTQKSILATNYGNSFRRIYSYSSSITSISDNGHEDPESPVESCAASILDHSDIRRIGSVGKFENHRSETISDLMDDFLEVEKMACLSENGDAPLGIISKTIHTAEGMKARCLSSNQSCFDTTNQNIEPEPKSECTDKTAERDEHMQDLMEKKLMLRENMQLLEELKAQLESSHKSCSLTEIQLKCMTESYKSLQTRVEELETENTYLQEKINELKNDLAEEKRSHHDALVRYNEIEEKMRRDKCLVCASNSAANSVKGTAFAFLNSIELVFEVMWDKELAAAEKKLAECQETLSILGRQLQAMCPQIGVTTTQHSKRLQVNEKLAKPTYGWSNSYGSCNSNEIDHAEACSVVSDIQGVVDEFSSHNSGATSRLSDTEGNFWLNSEAGSNH 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00922 785 Pfam Filament-like plant protein, long coiled-coil 518 701 IPR008587 -
Spst2g00922 785 Pfam Filament-like plant protein, long coiled-coil 95 496 IPR008587 -
Spst2g00922 785 Coils Coil 674 694 - -
Spst2g00922 785 SUPERFAMILY Tropomyosin 62 263 - -
Spst2g00922 785 Coils Coil 64 98 - -
Spst2g00922 785 MobiDBLite consensus disorder prediction 1 22 - -
Spst2g00922 785 Coils Coil 540 567 - -
Spst2g00922 785 Coils Coil 578 626 - -
Spst2g00922 785 Coils Coil 181 243 - -
Spst2g00922 785 Coils Coil 335 397 - -
Spst2g00922 785 MobiDBLite consensus disorder prediction 760 785 - -
Spst2g00922 785 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 716 - -
Spst2g00922 785 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00922 Spst-Chr2 7944340 7947487 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00922 - - gmx:100809230 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00922 2 7944340 7947487 Spst2g00922 2 7944340 7947487 ECH