Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00858 ATGTCATATCTGAAAGAAAACAAGGGTATCACTCTCACCCTTTGTTATTTATACTTGGTTCTTGGTTCTTGGACTCTCAGTGACTGTATCAAGCTTCCAAATTGTGCCATAAACCACAAAACATTCATGAGACCTTCTGTGGGGGGGGTTTCTTCCTCCTTCACAAATTTTCGTTCTGCCTCATCATGGTTCGAGTTGTATGCTGCTTTCTCCACATTCATGATGCTTCTAAGATCCGCAATCAACGATCTCATACCCAAAGAAGTTCGCTCTTTCATACACTCAAAACTAAAGGCTTTCTTCTCAGACCGTAAAAAAAGCAACCAGGTCTCACTTCAGATCACAGAAATTTGGGATGGCCACACCAACCAACTCTTCCAAGCCGTCCAAGAGTATCTCCCAACAAAGATCTCCCACTCGTACAAATCCCTCAGAGTTGGGAAAATTTCAATGCACAAGAACTTAGTAGTGGCAGTCGATGGAAAACAGGAGGTGGTGGATCGATTTGAAGACATCAAGCTCAGATGGAAACTCGTGGATGAAAGCTCCCAAAAAGGATCTGATAATCGCGAACCTCCTCGTCATCGCAAGTCCAGCAGTTTCGAGAGGCAATCGTTTACTCTAAGCTTTGATGAGAAGCACAGAGACGTGGTTATGAACAAGTATCTCTCCCACGTTCTGAGCGCATATGAGGATATGCAAGCAAAGCAGAGAACCATCAAGATCCATTCCATTGGTGGTGGAAGGTGTTGGCAGAAAAGTGACTTAACACATCCAGCATCGTTCGAGTCGCTTGCATTGGATCCAGAGCAGAAGCAGAGCATCATTGATGATTTGGATCGGTTTTTGCGTAGGAAGGAACTGTACAAGAAGGTGGGGAAGCCTTGGAAACGTGGCTACCTCTTGTATGGTCCCCCAGGAACAGGAAAATCTAGCCTTGTTGCCGCTATGGCCAACTACTTGAAGTTTGATGTGTATGATTTGGAACTCACCTCTGTGTTTTCTAACTCAGAGCTCATGCGAACCCTCAAGGAAACATCTAATCGCTCCATCATTGTCATCGAAGACATCGACTGCAACACAGAGGTGCTTGCTCGATCAACGGCTAAACCCTTGTCAGATTCAGATTCTGATTTTGACCGCAAGCATGTCAAGGTTAAGACAAACAGATTTACTTTGTCGGGTCTGCTTAACAACATGGATGGGTTGTGGTCAAGTGGTGGAGAGGAGCGGATTATAATCTTCACTACTAACCACAGAGAGAAAATTGACCCAGCATTGCTGCGCCCCGGTCGTATGGACATGCACATTCACATGTCCTTCCTCAGAAGCAAGGCATTTCGAATTCTAGCTTTCAATTATTTAGGCGTTAAAGGAGATCATCCACTCTTTGAGCAAATTGATGATCTGCTGGAGAAAATACAAGTCACCCCTGCGGTGGTAGCTGAGCAACTGATTAGATATGAGGATCCTGACGTTTGTTTGGAAGCACTTGTTCAATTTCTCAAGGAAAAGGCCAAGGAAACCCATCTTTTATATTTATGA 1545 0.444 MSYLKENKGITLTLCYLYLVLGSWTLSDCIKLPNCAINHKTFMRPSVGGVSSSFTNFRSASSWFELYAAFSTFMMLLRSAINDLIPKEVRSFIHSKLKAFFSDRKKSNQVSLQITEIWDGHTNQLFQAVQEYLPTKISHSYKSLRVGKISMHKNLVVAVDGKQEVVDRFEDIKLRWKLVDESSQKGSDNREPPRHRKSSSFERQSFTLSFDEKHRDVVMNKYLSHVLSAYEDMQAKQRTIKIHSIGGGRCWQKSDLTHPASFESLALDPEQKQSIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLELTSVFSNSELMRTLKETSNRSIIVIEDIDCNTEVLARSTAKPLSDSDSDFDRKHVKVKTNRFTLSGLLNNMDGLWSSGGEERIIIFTTNHREKIDPALLRPGRMDMHIHMSFLRSKAFRILAFNYLGVKGDHPLFEQIDDLLEKIQVTPAVVAEQLIRYEDPDVCLEALVQFLKEKAKETHLLYL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00858 514 MobiDBLite consensus disorder prediction 182 202 - -
Spst2g00858 514 ProSitePatterns AAA-protein family signature. 411 429 IPR003960 GO:0005524|GO:0016887
Spst2g00858 514 Gene3D - 438 510 - -
Spst2g00858 514 Pfam ATPase family associated with various cellular activities (AAA) 301 439 IPR003959 GO:0005524|GO:0016887
Spst2g00858 514 Gene3D - 252 437 IPR027417 -
Spst2g00858 514 Pfam Domain associated at C-terminal with AAA 85 179 IPR025753 -
Spst2g00858 514 CDD RecA-like_BCS1 275 439 - -
Spst2g00858 514 SMART AAA_5 296 443 IPR003593 GO:0016887
Spst2g00858 514 PANTHER BCS1 AAA-TYPE ATPASE 68 507 - -
Spst2g00858 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 490 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00858 Spst-Chr2 7230401 7232058 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00858 262 437 Miscellaneous Gene Families AT2G29080 30.435 4.69e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00858 - K08900 gmx:100787726 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00858 2 7230401 7232058 Spst2g00858 2 7230401 7232058 ECH