Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00855 ATGGTTAAGAAGACTGTCTTGAAGGTTGATATCAGTTGTGGCAAATGCAAAAGGAAACTCATCAAGACTGTATCTTCACTTCAAGGGGTGGATAAAATTGAAGCTGATGAAGGGAAGGGTACGTTGACCGTGACAGGGGATGCAGACCCATATGAAATAATAGTTCGCATTAGGAAAGCTGGGAAACATGCTGAAGTTGTGAGTGTTGGGCCTCCCCCGGCCCCTCCAAAACAAGACCAGAAGAAGCCCGAAGATAAAAAGCCCGAAGAAAAGAAGAAGCCCGACCCAGTGAAGCAAGAACAAAAACCGATTGAGCCCTATATGCAGATGCCATATTACTACCCACCACACCAACCAGTAGTGGTGTACATGAACAGAATGGAGGAGCCCAATCCATCTTGTACTATATTGTGA 414 0.4541 MVKKTVLKVDISCGKCKRKLIKTVSSLQGVDKIEADEGKGTLTVTGDADPYEIIVRIRKAGKHAEVVSVGPPPAPPKQDQKKPEDKKPEEKKKPDPVKQEQKPIEPYMQMPYYYPPHQPVVVYMNRMEEPNPSCTIL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00855 137 MobiDBLite consensus disorder prediction 63 105 - -
Spst2g00855 137 CDD HMA 6 65 IPR006121 GO:0046872
Spst2g00855 137 MobiDBLite consensus disorder prediction 78 100 - -
Spst2g00855 137 Gene3D - 1 72 - -
Spst2g00855 137 ProSiteProfiles Heavy-metal-associated domain profile. 2 65 IPR006121 GO:0046872
Spst2g00855 137 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 126 - -
Spst2g00855 137 Pfam Heavy-metal-associated domain 7 63 IPR006121 GO:0046872
Spst2g00855 137 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00855 Spst-Chr2 7199843 7200360 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00855 - - pvu:PHAVU_002G033800g 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00855 2 7199843 7200360 Spst2g00855 2 7199843 7200360 ECH