Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00851 ATGAAGCATTTTGCCGTGGTCTTTCTTTTGGCCATTCTGGTCCCTCAGGAGTGTTTCCATGCCACCGTGGAAGCAAGAGATGGTTTCGTCAGAACCAGAGGCATCCACTTCACGCTGAATGGATACCCTTACTATGCAAATGGCTTCAACGCCTACTGGTTAATGTATACAGCTTCTGACCCATCTCAGAGATTCAAGGTTTCAAATGCCTTCCGAGAAGCAACAAGTCATGGCCTTACTGTTGCTAGAACTTGGGCCTTCAGTGATGGTGGTTATAGACCCCTACAATATTCCCCTGGCTTCTATAACGAGCAAATGTTCACGGGGCTGGATTTCGTTATATCTGAGGCCAGAAAGTACGGAATTAAGCTCATACTGAGCTTGGTGAACAACTATGAAAACTTTGGAGGCAAGAAGCAGTACGTGAACTGGGCTAGAAGCCACGGACAGTACCTTACTTCAGATGATGATTTCTTCAGGAGCCCTGTTGTTAAGGGTTACTACATGAACCATGTCAGGACTGTTCTTAACAGATACAACAGATTCACCGGTACCCATTACAAAGATGACCCAACAATCATGGCGTGGGAGCTTATGAACGAGCCTAGGTGTACATCGGATCCTTCAGGAAGGACTATTCAGGCGTGGATCACGGAAATGGCCTGGTTTGTGAAGTCCATAGACAGGAACCACTTATTGGAAGCAGGACTGGAAGGGTTTTATGGTCAATCAACACCACAGAGAAAAAGATTGAATCCAGGTTTCGACATAGGCACAGACTTCATTGCAAATAACCGAATCCAAGCCATTGATTTTGCAACAGTCCACTGTTATCCCGACCAATGGGTATCGAGCTCAAACGAGCAGGATCAGCTTTCGTTCTTGAACAACTGGCTCAGTGCTCACTTCGTCGACGCACAATACACCATAAGGAAACCGATTCTGGTGGCAGAATTTGGGAAATCGTTTAGAGGTTCGGGGTACGAGGCGTACGAAAGGGATCAAGTGTTCAATGCAGTGTATTACAAAATATACGCTTCGGCTAAGAGAGGAGGAGCTGCAGGGGGGGCTTTGTTCTGGCAGCTTCTCACCGGGGGAATGGAATCTTTCCAAGACGGGTATGGAATCATGCTTGGGCAGAGTTCCTCTACGGGTGATCTCATTGCGCGCCAGTCTCGGAAGCTGTATCTGATTCGGAAGATCTTCGCGAGGGTGGCGAACATGCGGCGATGGCGAAGATCCAGAGCCAAGAGAGGATTTTCTGGCTCTGGAGGTGGGAACGGAGCATTTTGTGGCGCTGAACTTCCTTCAGAAACATCTAATCTGGAGTTGGATTCAAGAGCTAATGACTTCAGCCAGTATTGTCATAAACAAGTTTCAGTTGATAACCAGGCAACATGA 1401 0.4732 MKHFAVVFLLAILVPQECFHATVEARDGFVRTRGIHFTLNGYPYYANGFNAYWLMYTASDPSQRFKVSNAFREATSHGLTVARTWAFSDGGYRPLQYSPGFYNEQMFTGLDFVISEARKYGIKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRYNRFTGTHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAWFVKSIDRNHLLEAGLEGFYGQSTPQRKRLNPGFDIGTDFIANNRIQAIDFATVHCYPDQWVSSSNEQDQLSFLNNWLSAHFVDAQYTIRKPILVAEFGKSFRGSGYEAYERDQVFNAVYYKIYASAKRGGAAGGALFWQLLTGGMESFQDGYGIMLGQSSSTGDLIARQSRKLYLIRKIFARVANMRRWRRSRAKRGFSGSGGGNGAFCGAELPSETSNLELDSRANDFSQYCHKQVSVDNQAT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00851 466 FunFam Mannan endo-1,4-beta-mannosidase 6 26 399 - -
Spst2g00851 466 PANTHER - 3 417 IPR045053 GO:0004553
Spst2g00851 466 Gene3D Glycosidases 25 399 - -
Spst2g00851 466 Pfam Cellulase (glycosyl hydrolase family 5) 67 329 IPR001547 GO:0004553|GO:0071704
Spst2g00851 466 SUPERFAMILY (Trans)glycosidases 29 382 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00851 Spst-Chr2 7165638 7168786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00851 1 417 Glycoside Hydrolase AT5G66460 67.064 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00851 K19355 - gmx:100792073 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00851 2 7165638 7168786 Spst2g00851 2 7165638 7168786 ECH