Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00819 ATGGCAGCTGCAAGGTTAACCTCATACGTGGCGGTAACATCCGCTGCGGTGGTTTCCATGTCCACGTTCTCCGATCGTGCCTACGCTGACTCTTCGTTCCGATTCCCTTTCTTCTCTTCTTCACCTTCCAATACCCCGTCGCCGCAGAACCAGGCTTCCGACACCAATTCGGAGTCTCCGGCGCCCGAGGAACCTAACAAGTCGGGTTTCGACCCGGAATCGTTAGAAAGAGGAGCCAAAGCTCTCCGTGAAATCAACAGTTCTCCCTACTCAAAGCAGGTGTTTGATTTAATGCGAAAACAGGAGCAAACTCGCCTCGCTGAATTAGACGCTGAGAAAGTTCACTACGAACTTATTCAGTCTCAAGGAGATATTGAAAGGCAACGGAAAATGGCTGAAGAACAACGAAATTTAATACAAGAGCAAGCCCAGAGACAGGCCCAGGTGCTGCGGTATGAAGATGAACTGGCAAGGAAAAGAATGCAGACAGATCATGAAGCCCAAAGGCAACATAATGTTGAATTGGTCAAGATGCAAGAGGAGTCTTCTGTAAGAAAGGAGCGGGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACAGAGAGAGAGAGAGCTGAAATAGAAAGAGAAACTATTAGAGTTAAGGCAATGGCTGAGGCCGAAGGCCGAGCCCATGAAGCCAAATTGACTGAGGATCATAACAGGAGAATGCTTATAGAACGATTGCAAGGTGAAAGAGATAAATGGCTTGCTGCAATTAACACAACTTTCAGTCATATTGAAGGTGGTCTAAGGGCCTTGTTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCTACTGCACTAGCTGCAGGAGTATATACAACAAGAGAAGGTGCTAAAGTCACCTGGGGCTACATTAATCGAATTTTAGGGCAGCCGTCACTGATCCGGGAATCATCAATGGAAAACTTTCCAGGATCGAAGATCATTTCTCAAGCCAAAAATAAACTTCTTAATAATAGTAGTTTGGTTGGGGCAGAAAAACCTATTGGGTGTAAAAATGGCATTGGAAATGTAATCCTCCATCCTTCGTTACAGAGAAGAATAGAGCATCTTGCACGTGCAACATCAAATACGAAAGCCCATCAGGCACCATTTCGCAACATGCTTTTTTATGGGCCTCCGGGCACTGGTAAAACGATGGTTGCAAGGGAAATAGCTAGAAGATCGGGTTTGGATTATGCCATGATGACTGGAGGAGATGTTGCACCTCTGGGCGCTCAGGCTGTTACCAAAATTCATGATATATTTGATTGGGCCAAGAAATCTAGAAAAGGCCTATTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCACACATGAGTGAAGCTCAGCGAAGTGCTCTCAACGCTTTGCTCTTCAGAACTGGTGATCAGTCTCGAGACATAGTACTTGTCCTTGCGACAAACAGACCAGGTGATCTTGACAGTGCAGTTACTGATCGCATTGATGAAGTGATTGAATTTCCGCTTCCAGGAGAGGAGGAGCGTCTAAAGTTATTGAAGCTCTATTTAAACAAATATTTATGTGATGACAATAATGGCTCCAAGGGAGGCTTGTTGCTGAAGAAGCAGCCTCAGAAGATTACTATAAAAGATTTATCCGAAGATGTTTTCAGAGAGGCTGCCAAGAAGACAGAGGGATTTTCTGGGCGTGAAATTGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGCCCAGATTGCATCTTGGATTCCCAGTTGTTTAAAGAGATTGTAGATTACAAGGTGGTCGAACATCATCAACGATTAAAACTAACAGCTGAAGGTGGCCAGCCCGGCCAAATATGA 1893 0.4543 MAAARLTSYVAVTSAAVVSMSTFSDRAYADSSFRFPFFSSSPSNTPSPQNQASDTNSESPAPEEPNKSGFDPESLERGAKALREINSSPYSKQVFDLMRKQEQTRLAELDAEKVHYELIQSQGDIERQRKMAEEQRNLIQEQAQRQAQVLRYEDELARKRMQTDHEAQRQHNVELVKMQEESSVRKERARQATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERLQGERDKWLAAINTTFSHIEGGLRALLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMENFPGSKIISQAKNKLLNNSSLVGAEKPIGCKNGIGNVILHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARRSGLDYAMMTGGDVAPLGAQAVTKIHDIFDWAKKSRKGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYLCDDNNGSKGGLLLKKQPQKITIKDLSEDVFREAAKKTEGFSGREIAKLMASVQAAVYGRPDCILDSQLFKEIVDYKVVEHHQRLKLTAEGGQPGQI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00819 630 MobiDBLite consensus disorder prediction 40 63 - -
Spst2g00819 630 Coils Coil 125 145 - -
Spst2g00819 630 SMART AAA_5 385 518 IPR003593 GO:0016887
Spst2g00819 630 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Spst2g00819 630 MobiDBLite consensus disorder prediction 40 73 - -
Spst2g00819 630 FunFam ATPase family AAA domain-containing protein 3 344 533 - -
Spst2g00819 630 PANTHER PUTATIVE ATP-ASE 20 624 - -
Spst2g00819 630 MobiDBLite consensus disorder prediction 161 210 - -
Spst2g00819 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 612 IPR027417 -
Spst2g00819 630 Pfam ATPase family AAA domain-containing protein 3, N-terminal 52 317 IPR021911 -
Spst2g00819 630 Coils Coil 183 217 - -
Spst2g00819 630 Gene3D - 329 536 IPR027417 -
Spst2g00819 630 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Spst2g00819 630 MobiDBLite consensus disorder prediction 161 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00819 Spst-Chr2 6937123 6942457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00819 365 592 Miscellaneous Gene Families AT5G53170 29.289 9.78e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00819 K17681 - gmx:100777755 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00819 2 6937123 6942457 Spst2g00819 2 6937123 6942457 ECH