Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00808 ATGGTGCACAGCGCGTACGATTGTGTCGAGCTGGTGCGTGAGTGCCCTGCCAAGATCGAATCCATCGAATCCTACGGTTCGAAGCTCCTCCTGGGTTGCTCCGATGGATCGCTCCGAATATTCGCGCCGCAAACAGAATCCTCCTCCGACGGCTCAAAGTTCTACGAGTTGGAGAGGAACCTCGTCGGGTTCGCGAAGAAGCCCGTGCTCTCAATGGCGGTGGTGGAGTCGCGAGAGTTCCTCATATCGCTGTCCGAATCCATCGCCTTCCACAAACTCCCTTCCTTCGAGACCATCGCTGTCATCACCAAGGCAAAGGGCGCCAACGTCTTCTGCTGGGATCATCGCCGAGGGTTCCTCTGCTTCGCCAGGCAGAAGCGCGTTTGTATCTTCAGACACGACGGTGGCAGGGGATTTGTAGAGGTGAAAGAATATGGTGTCGTGGATACGGTGAAGTCCTTGTGTTGGTGCGGCGAGAATATATGTTTGGGGATTAGAAGAGAGTATGTGATTCTGAATGCTTCAAATGGAGCTTTGTCTGAGGTTTTCACTTCGGGGAGACTAGCGCCTCCTCTGGTCGTTTCTCTTCCCACCGGAGAACTTCTTCTTGGAAAGGAGAACATTGGGGTTTTCGTGGACCAAAATGGGAAGCTTCTTCCTGAAGGTAGGATTTGCTGGTCCGAGGCTCCTTTGGAAGTTGTGATTCAGAAGCCCTATGCTATAGCTTTGCTGCCCAGATTTGTGGAGATTCGATCTCTCCGAGCTCCTTATCCACTGATACAGACTGTTGTTCTTCGAAATGTACGCCATCTTTGCCAGAGCAATGATTCCGTGATACTTGCTTTGGATAATTCTATTCATGGCCTCTTCCCTGTTCCCCTTGGAGCCCAGATAGTCCAATTAACAGCTTCTGGCAACTTTGAGGAGGCCTTGTCATTGTGCAAACTTCTTCCACCTGAAGATTCAAGTCTCCGTGCTGCAAAGGAGGGTTCAATTCATATAAGATACGCTCACTATCTTTTTGAGAATGGGAGCTATGAAGAGGCTATGGAACATTTTCTGGCATCTCAAGTAGATATAACCCATGTGCTTTCCCTGTATCCATCCATTATTCTTCCAAAGACAACTATTGTTCACGAGTTAGAAAAGTTGGACATTGATGGGGATGCTTCATATCTGTCCAGAGCTTCTTCAGGTGTTTCAGATGATATGGAACCCTCATCAACATCTCATATGTCAGAATCTGATGAAAACGCAGCCCTTGAATCCAAAAAAATGAACCATAATATGCTTATGGCCCTCATAAAATATTTACAGAAGAAGAGATATAGTTTTATTGAGAAGGCCACTGCAGAAGGAACTGAAGAAGTCGTTTTAGATGCTGTTGAGGATAACTTTGCATCTTACAATAGGCTTAAGAAAACAAACAAGGGCCGTGGTAGTATGCCTGTTAGTTCAGGTGCTCGGGAGATGGCTTCAATATTGGATACTGGTTTACTTCAAGCATTGCTTCTAACTGGACAACCTTCAGTGGCTTTAGAATTACTGAGAGGTGTTAACTACTGTGATTTGAAAATCTGTGAGGAAATACTTCGGAAAGGCAACCACAATGTTGCTTTGTTAGAACTTTACAAGTACAATTCATTGCACCGGGAGGCTCTTGAACTTCTTCACAAATTGGTGGATGAGTCAAAATCTAGCAAGTCTGAAATTACACAAAGATTCAAGCCTGAGGAGATTGTGGAGTATCTCAAGCCACTCTGTGGGAGTGACCCCATACTTGTACTAGAGTTCTCAATGCTTGTTCTTGAAAGCTGTCCATCTCAAACTATAGAACTCTTTCTGACTGGAAACATTCCAGCAGATATGGTGAGCTCATATTTGAAGAAGCATTCTCCAAACATGCAAGCTAGGTACTTGGAGCTTATGCTTGCAATGAATGAGAATGCGGTATCTGGCAATTTGCAGAATGAAATGGTCCATATATATCTTTCTGAAGTGCTCGATTGGCATGCTGATTTATGTGCTCAACATAAATGGGATGAGAAAGATTATTCCCCAACAAGGAAAAAACTATTGTCTGCCTTAGAGAGTATAGCAGGATACAATCCAGAGGCTTTACTAAAACGTCTTCCACCAGATGCTTTATATGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTGGCATTATCTTTATATGTTCATAAGCTCAATGCTCCAGAACTGGCATTGTCATATTGTGATCGGGTCTATGAGTCTATGCACCAGCCATCTGCAAAATATTCCAGTAACATATACCTTGTGCTTTTGCAAATTTATTTGAATCCTCGAAGGACCACAGCAGGTTTTGAAAAGAGAATTACAAATCTATTATCCTCGCAGCATAAAACGGTTCCAAAGCTTACTTCTACACCATCCATAAAAAGTAGAGGTCGAGGGTCTAAGAAAATTGCTGCAATAGAGGGTGCAGAGGACACAAAAGTTAGTTTAAGCAGCACTGACAGTGGCAGGAGTGATGGTGATGGTGATGCGGATGAATATAGTGAGGGTGGTTCTACTACTATCATGCTTGATGAGGTCCTTGATGTGTTGAGCCGCAGGTGGGATAGGATAAATGGAGCTCAGGCCCTTAAACTTCTACCGAAAGAGACAAAATTACAGGACCTGCTTTCATTTCTCGGACCCCTTCTGAGAAAATCAAGTGAAATGTACCGAAACTGTTCGGTGATCAAGAGTTTGAGACAAAGTGAGAACCTTCAGGTGAAAGATGAACTGTATAGTCAGAGGAAAGCAGTTGTGAAGATAACCGGTGATAGCATGTGCTCTCTGTGCCATAAGAAACTAGGGACTAGTGTTTTTGCTGTCTACCCAAATGGTAGCACTCTCGTGCACTTTGTCTGTTTCAGAGATTCTCAAAATATGAAAGCCGTAGGCAAAGGGTCCCAATTGAGGAAGCGATTATGA 2976 0.4419 MVHSAYDCVELVRECPAKIESIESYGSKLLLGCSDGSLRIFAPQTESSSDGSKFYELERNLVGFAKKPVLSMAVVESREFLISLSESIAFHKLPSFETIAVITKAKGANVFCWDHRRGFLCFARQKRVCIFRHDGGRGFVEVKEYGVVDTVKSLCWCGENICLGIRREYVILNASNGALSEVFTSGRLAPPLVVSLPTGELLLGKENIGVFVDQNGKLLPEGRICWSEAPLEVVIQKPYAIALLPRFVEIRSLRAPYPLIQTVVLRNVRHLCQSNDSVILALDNSIHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENGSYEEAMEHFLASQVDITHVLSLYPSIILPKTTIVHELEKLDIDGDASYLSRASSGVSDDMEPSSTSHMSESDENAALESKKMNHNMLMALIKYLQKKRYSFIEKATAEGTEEVVLDAVEDNFASYNRLKKTNKGRGSMPVSSGAREMASILDTGLLQALLLTGQPSVALELLRGVNYCDLKICEEILRKGNHNVALLELYKYNSLHREALELLHKLVDESKSSKSEITQRFKPEEIVEYLKPLCGSDPILVLEFSMLVLESCPSQTIELFLTGNIPADMVSSYLKKHSPNMQARYLELMLAMNENAVSGNLQNEMVHIYLSEVLDWHADLCAQHKWDEKDYSPTRKKLLSALESIAGYNPEALLKRLPPDALYEERAILLGKMNQHELALSLYVHKLNAPELALSYCDRVYESMHQPSAKYSSNIYLVLLQIYLNPRRTTAGFEKRITNLLSSQHKTVPKLTSTPSIKSRGRGSKKIAAIEGAEDTKVSLSSTDSGRSDGDGDADEYSEGGSTTIMLDEVLDVLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLLRKSSEMYRNCSVIKSLRQSENLQVKDELYSQRKAVVKITGDSMCSLCHKKLGTSVFAVYPNGSTLVHFVCFRDSQNMKAVGKGSQLRKRL 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00808 991 SUPERFAMILY WD40 repeat-like 26 167 IPR036322 GO:0005515
Spst2g00808 991 ProSiteProfiles Citron homology (CNH) domain profile. 16 278 IPR001180 -
Spst2g00808 991 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 598 785 IPR000547 GO:0006886|GO:0016192
Spst2g00808 991 PANTHER CNH DOMAIN CONTAINING 1 979 IPR032914 GO:0016192
Spst2g00808 991 Pfam CNH domain 26 273 IPR001180 -
Spst2g00808 991 MobiDBLite consensus disorder prediction 397 416 - -
Spst2g00808 991 Pfam Region in Clathrin and VPS 624 753 IPR000547 GO:0006886|GO:0016192
Spst2g00808 991 MobiDBLite consensus disorder prediction 397 419 - -
Spst2g00808 991 Pfam Vacuolar sorting protein 39 domain 1 495 603 IPR019452 -
Spst2g00808 991 Pfam Vacuolar sorting protein 39 domain 2 865 973 IPR019453 -
Spst2g00808 991 MobiDBLite consensus disorder prediction 827 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00808 Spst-Chr2 6840280 6847092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00808 K20183 - gmx:100805342 1804.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00808 2 6840280 6847092 Spst2g00808 2 6840280 6847092 ECH