Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00782 ATGTTAACAATGGAGTCTCGAAAACAAGCTTTGCCATTATCTTGGGTCCTCATCTTCTTCCTTGCCATTTCCTTGTGTGGAGTGAAGGCATCAAGTGGCAAGCCTCAAGAGGGTCCTGTGGTGGAAAAGGATCAATGGAGGAAATTACTTGTCACTGAATTCGGACAGATAACTGCCCTTGACATCAAGGAGGATCCAGAGAAACTACCCTACCATCTTCAGTTCATCACATTGGAGCCTAACTCGCTATTTCTTCCTGTGCTTCTACATGCAGATGTGGTATTTTATGTTCATACAGGGAGTGGAAAGCTGACTTGGGTTAATGATGATGGTACTGGAACGATCCCTTTACGCAAAGGAGATCTCTGCAGTCTCGGTGAAGAATCTGTTTTCTATATACAGAGCGACTTAGAGGCTGAAAGAAGGAAACTAAGGATTTATGCAATGTTCACCAATACAAAAGACAATACTTTTAATCCGTCAATCGGTGCTTACTCAAGAATCAACGAACTGGTTAAGGGCTTTGATAAGAAAATCATGCAAGCAGCTTTAAAGGTGCCAGATGATTTGATTGATGAAATAATTAACAAGAGAAACACCCCAGCTATAGTGCATGCGGTTTCAAAGCAGAGGAATGTTGTGCAGGAACCGGAGGCTTCGTTTCTTAAAAACTTTCTAGGCGTTGGATCCAACTCCAACAAACTCGAAAAATACAACATCTTTGATCATGATCCTGACTTCAGAAATCGTTATGGATGGAGTGTAGCAGTGACCAAAAGGCAATTGAAGTCATTGAAGCGGACCAACATTGGATTTCTTATGGTGACTTTGGCCAGGGGATCAACAATGGGGCCTCATTGGAACCCGAAGGCAACAGAGTTGGCAGTGGCAGTAGAAGGGAAAGGCGTGGTCCGAGTGGTATGTGGAAGCAACAATGAAGATGAGACAGCGTGCCAAAACATGAGGTTTAAGGTTAATGCCGGTGATGCTTTTGTGGTGCAAAGGTTTCATTCAATGGCTCAGATGTCATTCAACGATGAAGCGTTTGTTTTTCTTGGCTTCAGCACTTCAGCAAAGGACAACCATCCTCAATTTTTATCGGGAAAGGGATCAGTGCTTCATAAACTGGACAAGCACATAATGGCTACCTCTTTGGGTGTGAGTGACAGAACCGTTGACGACCTTCTGCATTCTCCCCAGGATTCCATCATTTTCGGAAGAAGAGCATGGCCACTGGAGCAGCTTGGAAGGGAGGAGAGTTTTGAAAGTAAGAAACCTTTGATTCCTTCTCAAAGTCTTGAACTTTAG 1308 0.4358 MLTMESRKQALPLSWVLIFFLAISLCGVKASSGKPQEGPVVEKDQWRKLLVTEFGQITALDIKEDPEKLPYHLQFITLEPNSLFLPVLLHADVVFYVHTGSGKLTWVNDDGTGTIPLRKGDLCSLGEESVFYIQSDLEAERRKLRIYAMFTNTKDNTFNPSIGAYSRINELVKGFDKKIMQAALKVPDDLIDEIINKRNTPAIVHAVSKQRNVVQEPEASFLKNFLGVGSNSNKLEKYNIFDHDPDFRNRYGWSVAVTKRQLKSLKRTNIGFLMVTLARGSTMGPHWNPKATELAVAVEGKGVVRVVCGSNNEDETACQNMRFKVNAGDAFVVQRFHSMAQMSFNDEAFVFLGFSTSAKDNHPQFLSGKGSVLHKLDKHIMATSLGVSDRTVDDLLHSPQDSIIFGRRAWPLEQLGREESFESKKPLIPSQSLEL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00782 435 Pfam Cupin 238 392 IPR006045 -
Spst2g00782 435 Gene3D Jelly Rolls 33 217 IPR014710 -
Spst2g00782 435 PANTHER OS03G0336100 PROTEIN-RELATED 14 405 - -
Spst2g00782 435 CDD cupin_7S_vicilin-like_N 49 210 - -
Spst2g00782 435 Gene3D Jelly Rolls 230 406 IPR014710 -
Spst2g00782 435 SUPERFAMILY RmlC-like cupins 49 400 IPR011051 -
Spst2g00782 435 SMART Cupin_1_3 238 393 IPR006045 -
Spst2g00782 435 CDD cupin_7S_vicilin-like_C 245 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00782 Spst-Chr2 6623458 6626188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00782 6 405 Miscellaneous Gene Families AT2G18540 40.326 4.46e-98 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00782 - - vum:124824391 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00782 2 6623458 6626188 Spst2g00782 2 6623458 6626188 ECH