Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00758 ATGCGAATGCACTTGAGGTCGTTGTTTTGCGAGGTTAACCTGTTGAACGGGTTAAGCTCGCTAGTGCACGCTCGTTGCTATGCCCGTCGTCGTGAACCATTTCCCACAAAAGTTTCTCACTACCTTAACCGTGCCAAACTCATTGACTCCATTAGACTCACTCTACGGTCTAACAACCCGAATTCCTCCCTTCCCTCTCTCATAAACCATCGTCTTTTTGACTCTTTCGTGCTCACTCATGCCCTTCGTTCTGCGCCTTCTGCAGATTCCGCTCTTTCCCTTGTCCATGCATTCGAAGAAAATTCTAGTTTTTCCCATACCCACAACACACTCCATGCACTTGCAACTGTGCTTGCCAAGGCTGGTAGATGTTCTGAGCTCAAATCTCTCACTGATGCTATCAGAGCCAACCGATTCGGCACTGTTCGGATCAGCTTCATGAATCTCATGCAGTGGCATGCTGCAGCTAGGGACCTTGACACTGTCCTTCAAGTGTGGGAACAGTATACGCTTGAGAGCAGTCATCTATGCACTGAATCATATAACATTGTTATGGCTCTTTATGCTCAAATGGGAAAGGACTCCGAGGCTGTACGAGTTTTTCAGAGGATGATTGATGAAGGGTCTCTGCCGAATTGCAGAAGCTACACTGTAATAATCGAGCACCTTGTGAAGTCCGGGAAGTTATCAGAAGCAATGGAGGTTTTTAACTTGTTGCCTTTGATGAGGGTCAAACGCACTTTGAAACAGTACTCCGTTCTGCTTGAGAGTTTTGTAGGTAGCAAACGGTTTGATGAATTGAGGATTTTAGCTGATGAAATGCAGGTTGATGGAATATTGCCTAGTAAAGGCTTGAGTTTGTTGCTGCAGCAGAGGAAGGAGGAAGGAATTCTTGGAGATAAGGAGCAATTACTGAGAGGAATTTTTCCAGATGAGAGAATCAGGAGTGTAAGTTATTCTATTGATAGTGGTGAGGAGGATGATGATAATGATAATGATAATAAGAATGAGAATGAGGGTGAAGATGAGAAAATAAATGATGCTATTCAATGTGATAATGTTGATGGAATTCATTTAAAACCGTGGCTGGACCCACGGTCTTTGGCCGGAGCCTTGCGGAATTGGAGTCCCGATGAGGTAGCAGCACTAGAGGGTGCAAACTTTGTGTGGACAACAAGGTTGATTTGCAAGATGCTTAGAAATTTCAAAACACCAGAAGCTGCATGGAGTTTCTTCTGCTGGGTTTCTAATCATAGTGGATTTACTCATGACATATACACGGTACAAAGAATCATGACCTTTCTAGCTCGTCATGGACGTACTGACTTGGTTGATACACTCATCTCCAAGATCAGAATCGAGGGAATGAGACTACCATTCAGCACCATCAGACTGATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTATGAAGGTTTTCAATGATGATCGAATACTTTGCGGTCCCATATCAAATGTTAACCTGATGCTTCTTTATTCGTCTCTTCTAAGAACATTGACAAAGTGTGGAAGAAATTCCGATGCCTTGGATATGCTTGATGACATGATTTTAAATGGTATTTGCCCAGATATCCAGACATTTTCAGGCCTAATGCTCTACTTTTCACAGCTTGGGGACATAAAAACAGTGCAAAAGCTCTTTGCAATGGTTAGGCAGAGCGGTCTAGAGCCAGATGCTTATTTGTTTAAGGTATTAATCCAAGGTTATTGCAAGTCAAATAGAGCTGCACTAGCATGGAGGCTATTCGAAGACATGAAGAATTCTGGTTTAGTGCCTGACTCTGCCACCAAAGAGTTGTTAGTGAAAAGCCTCTGGAAAGAGGGGAGACGGAGAGAGGCTGCAGCAGTGGAAGAGAGTTGTGAGGAAATAAATACGGTTCTTCCACTTGCATTGCAGGGTCATGAATGGACTGTCAGCTCTGCAGATCTCACAAGAGTTTATAATATTTATTCTAATTCTTTTGCTTAA 1998 0.4304 MRMHLRSLFCEVNLLNGLSSLVHARCYARRREPFPTKVSHYLNRAKLIDSIRLTLRSNNPNSSLPSLINHRLFDSFVLTHALRSAPSADSALSLVHAFEENSSFSHTHNTLHALATVLAKAGRCSELKSLTDAIRANRFGTVRISFMNLMQWHAAARDLDTVLQVWEQYTLESSHLCTESYNIVMALYAQMGKDSEAVRVFQRMIDEGSLPNCRSYTVIIEHLVKSGKLSEAMEVFNLLPLMRVKRTLKQYSVLLESFVGSKRFDELRILADEMQVDGILPSKGLSLLLQQRKEEGILGDKEQLLRGIFPDERIRSVSYSIDSGEEDDDNDNDNKNENEGEDEKINDAIQCDNVDGIHLKPWLDPRSLAGALRNWSPDEVAALEGANFVWTTRLICKMLRNFKTPEAAWSFFCWVSNHSGFTHDIYTVQRIMTFLARHGRTDLVDTLISKIRIEGMRLPFSTIRLIIDFYGISKNADAAMKVFNDDRILCGPISNVNLMLLYSSLLRTLTKCGRNSDALDMLDDMILNGICPDIQTFSGLMLYFSQLGDIKTVQKLFAMVRQSGLEPDAYLFKVLIQGYCKSNRAALAWRLFEDMKNSGLVPDSATKELLVKSLWKEGRRREAAAVEESCEEINTVLPLALQGHEWTVSSADLTRVYNIYSNSFA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00758 665 MobiDBLite consensus disorder prediction 320 347 - -
Spst2g00758 665 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 246 IPR002885 -
Spst2g00758 665 Pfam PPR repeat 502 530 IPR002885 -
Spst2g00758 665 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 498 532 IPR002885 -
Spst2g00758 665 Pfam PPR repeat family 178 224 IPR002885 -
Spst2g00758 665 Pfam PPR repeat family 567 614 IPR002885 -
Spst2g00758 665 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
Spst2g00758 665 NCBIfam pentatricopeptide repeat 180 213 IPR002885 -
Spst2g00758 665 NCBIfam pentatricopeptide repeat 502 534 IPR002885 -
Spst2g00758 665 NCBIfam pentatricopeptide repeat 572 604 IPR002885 -
Spst2g00758 665 NCBIfam pentatricopeptide repeat 215 239 IPR002885 -
Spst2g00758 665 Gene3D Tetratricopeptide repeat domain 497 657 IPR011990 GO:0005515
Spst2g00758 665 Gene3D Tetratricopeptide repeat domain 80 307 IPR011990 GO:0005515
Spst2g00758 665 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 533 567 IPR002885 -
Spst2g00758 665 Gene3D Tetratricopeptide repeat domain 386 493 IPR011990 GO:0005515
Spst2g00758 665 PANTHER OS01G0167750 PROTEIN 3 664 IPR044175 -
Spst2g00758 665 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 568 602 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00758 505 638 Glycosyltransferase AT1G05670 25.735 3.31e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00758 - - gmx:100779372 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00758 2 6361003 6363000 Spst2g00758 2 6361003 6363000 ECH