Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00732 ATGATAGGGCCATCGAGAAAAGGATATGGATTCTTAGAGGAAGGAAGTTCCCATGGACAAAAGTTTGGAAAGTTAAAGAAAGACGAATTCGATGGTTATAACTCTGATAACCATCCAAGAAAAAATAGCCCCGTTACTTTGGATGCACCTCATATAGATCCTCTAATGGTAATAGAAAATGCTCCTTATGACCCTTCCCTCTCTCCCTTATCAAAATCCCCATGGTCCTCTCACGTGAACGAAGATGCTTCCATGTCCAACAGCATCGATGCTCTAGTAGGGTCCCTAGTCCGAGAAGAGGGTCACATTTACTCCCTCGCTGCAACCAAGGACTTGTTATACACAGGTTCAGAAAGTAAAAATATTCGCGTGTGGAAGAACCAAAGGGAGTTCGCAGGGTTCAGATCCAACAGCGGGTTAGTGAAAGCAATTGTGATCGCGGGGGAAAAAATCCTCACGGGACACCAAGATGGAAGGATAAGAGTGTGGAAAGTGTCGGGGAAAAATCAGCAACAACACAAACGTGTGGCGACATTGCCGACGTTAAGAAACTACGTCAAATGTTCGATGAACCCAAGTAATTACGTGGAAGTGAAGCGACACCGTAACGTGTTGTGGATCAAACACTATGACGCCATTTCATGTCTCGGCTTAACGGAGGATCATGCTTATATATACTCTGCCTCGTGGGATAAAACTTTCAAAGTGTGGCGAGCGTCGAACTTCAAGTGTTTAGAGTCTGTGGCAGCGCATGACGATGCTGTTAACGCGCTTGTTGTGGGGATGGAAGAGTTGATTTTCACAGGTTCAGCTGATGGCACTGTTAAGATTTGGCGACGGGAGATTCACGGAAAAGGGACGAAACATTTTTTCTCGCATACATTGTTGAAGCAAGAGTGTGCGGTGACAGCGTTAGCGATGGGTGGTGAGGGAAATTTTCTGTACGCTGGGTCTTCCGATGGGTTGGTGAATTATTGGGTGCGGGAGACAAATTTGGAGCACAGGGGCATATTAAGGGGGCACAAGTTGGCAGTGTTGTGCTTGGTTGTGGCAGGAAATTTAGTGTTCAGTGGCTCTGCTGACATGGGCATATGTGTATGGAAGAGGTCAATGAATGAAGAGCATGCACGCATAAATGTTTTGTCCGGCCACACTGGCCCAGTTAAGTGTCTGGCCGTGGAGAGGGATCTTGACGCCATGTGCAATGAGCGACGATGGATTTTGTACAGTGGGAGTTTGGACAAGTCTGTGAAGGTGTGGAAGGTCTCCGAGAATGCAACTACTCCAACCACCACCCACCCACCCAGAGGTAGTGTTGATCACTTCCCCCCAGTTTCATCGTTAAGGAAATCGGGGTCCAAGAGATACTAG 1371 0.4712 MIGPSRKGYGFLEEGSSHGQKFGKLKKDEFDGYNSDNHPRKNSPVTLDAPHIDPLMVIENAPYDPSLSPLSKSPWSSHVNEDASMSNSIDALVGSLVREEGHIYSLAATKDLLYTGSESKNIRVWKNQREFAGFRSNSGLVKAIVIAGEKILTGHQDGRIRVWKVSGKNQQQHKRVATLPTLRNYVKCSMNPSNYVEVKRHRNVLWIKHYDAISCLGLTEDHAYIYSASWDKTFKVWRASNFKCLESVAAHDDAVNALVVGMEELIFTGSADGTVKIWRREIHGKGTKHFFSHTLLKQECAVTALAMGGEGNFLYAGSSDGLVNYWVRETNLEHRGILRGHKLAVLCLVVAGNLVFSGSADMGICVWKRSMNEEHARINVLSGHTGPVKCLAVERDLDAMCNERRWILYSGSLDKSVKVWKVSENATTPTTTHPPRGSVDHFPPVSSLRKSGSKRY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00732 456 ProSiteProfiles Trp-Asp (WD) repeats profile. 206 247 IPR001680 GO:0005515
Spst2g00732 456 MobiDBLite consensus disorder prediction 19 36 - -
Spst2g00732 456 SUPERFAMILY WD40 repeat-like 101 449 IPR036322 GO:0005515
Spst2g00732 456 MobiDBLite consensus disorder prediction 426 456 - -
Spst2g00732 456 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 248 278 - -
Spst2g00732 456 Pfam WD domain, G-beta repeat 379 421 IPR001680 GO:0005515
Spst2g00732 456 Pfam WD domain, G-beta repeat 209 237 IPR001680 GO:0005515
Spst2g00732 456 Pfam WD domain, G-beta repeat 243 278 IPR001680 GO:0005515
Spst2g00732 456 Gene3D - 82 201 IPR015943 GO:0005515
Spst2g00732 456 Gene3D - 202 438 IPR015943 GO:0005515
Spst2g00732 456 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 278 IPR001680 GO:0005515
Spst2g00732 456 MobiDBLite consensus disorder prediction 1 48 - -
Spst2g00732 456 PRINTS G protein beta WD-40 repeat signature 151 165 IPR020472 -
Spst2g00732 456 PRINTS G protein beta WD-40 repeat signature 408 422 IPR020472 -
Spst2g00732 456 PRINTS G protein beta WD-40 repeat signature 266 280 IPR020472 -
Spst2g00732 456 ProSiteProfiles Trp-Asp (WD) repeats profile. 381 430 IPR001680 GO:0005515
Spst2g00732 456 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 49 426 IPR045182 -
Spst2g00732 456 SMART WD40_4 241 279 IPR001680 GO:0005515
Spst2g00732 456 SMART WD40_4 127 164 IPR001680 GO:0005515
Spst2g00732 456 SMART WD40_4 283 327 IPR001680 GO:0005515
Spst2g00732 456 SMART WD40_4 331 368 IPR001680 GO:0005515
Spst2g00732 456 SMART WD40_4 89 126 IPR001680 GO:0005515
Spst2g00732 456 SMART WD40_4 374 421 IPR001680 GO:0005515
Spst2g00732 456 SMART WD40_4 200 238 IPR001680 GO:0005515
Spst2g00732 456 FunFam BnaA09g28200D protein 196 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00732 Spst-Chr2 6115435 6116805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00732 206 422 Miscellaneous Gene Families AT5G08390 22.973 1.28e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00732 - - gmx:100778593 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00732 2 6115435 6116805 Spst2g00732 2 6115435 6116805 ECH