Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00501 ATGAGTTCTCTCGCCGGACTTGCTCCACTTGAGGCTGTTCTCTTTGATGTAGATGGAACTCTCGGTGATTCTGATCCACTCCACTACTATGCTTTGCGTGAAATGCTCCAAAAGATTGGTTTTAATGGAGGTGTTCCTATAACGGAGGAATTTTTCTTTGAGAAATTTTCTGGCAAGCACAGCGTTGATACTGCCTTAGTTGCCTTTCCTGGTGATCTGGAACAAGGTTTGAAGTTTGTAGAAGATAAGGAAGCCATGTTCCGGAGATTGGCGGCAGAGCAACTGAAGCCTATGAAAGGCCTTGATAAAGTTAGGACATGGGTTGAAAACCATGGTCTGAAGAGAGCTGCAGTTACCAATGCTCCAAGAGTAAATGCAGAACTCATGATCTCAAAACTTGGTCTCTCAGACTTCTTTGATGCTCTTATTATTGGTGATGAATGTGAACGTGGAAAACCTCATCCAGACCCCTACTTGAAAGCTCTTGAAGTTCTGAAGGCATCGAAGGATCATGCATTTGTATTTGAGGATTCTTTTTCAGGGATTACAGCTGGAGTGGCAGCTGGAATGCCTGTTATAGGTTTAGCTACACGAAACCCAGAGCATTTATTGATGGAAGCAAAGCCTGCTTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGAAGCTTTAGAAGACCTTGACAAAGCTGATGCGGATAAGTAG 708 0.4308 MSSLAGLAPLEAVLFDVDGTLGDSDPLHYYALREMLQKIGFNGGVPITEEFFFEKFSGKHSVDTALVAFPGDLEQGLKFVEDKEAMFRRLAAEQLKPMKGLDKVRTWVENHGLKRAAVTNAPRVNAELMISKLGLSDFFDALIIGDECERGKPHPDPYLKALEVLKASKDHAFVFEDSFSGITAGVAAGMPVIGLATRNPEHLLMEAKPAFLIKDYEDPKLWEALEDLDKADADK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00501 235 Gene3D - 11 219 IPR023214 -
Spst2g00501 235 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 10 218 - -
Spst2g00501 235 Pfam Haloacid dehalogenase-like hydrolase 13 194 IPR041492 -
Spst2g00501 235 NCBIfam HAD-IA family hydrolase 79 194 IPR006439 -
Spst2g00501 235 Gene3D Putative phosphatase; domain 2 25 93 IPR023198 -
Spst2g00501 235 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 11 231 - -
Spst2g00501 235 SUPERFAMILY HAD-like 9 227 IPR036412 -
Spst2g00501 235 CDD HAD_BPGM-like 12 197 - -
Spst2g00501 235 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 139 155 IPR006439 -
Spst2g00501 235 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 108 121 IPR006439 -
Spst2g00501 235 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 10 21 IPR006439 -
Spst2g00501 235 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00501 Spst-Chr2 4069942 4070969 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00501 - - ccaj:109800144 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00501 2 4069942 4070969 Spst2g00501 2 4069942 4070969 ECH