Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00500 ATGATTACCCCTCTTGATTTTCTTGGTTCTAGAGCCTGCTGCTCAAGAAATCCAAGTGGATGCATATGCAGCGGGAAAAGATCTCCATTTAGACCAAAGGGAGTAGATTGGAAGATGCTTCCAGGAGGACGAGTGAAAAAAAAAGGATCATTAAAGGGATCCCTTCGCAATGTCCTCGGAGGTCTGAAGGTGTCAAAGCCTCCGAAACCGGCAAAAGAGCCACCAAAGTTAAAGAAAGGATCCATGCCACCTCTGTGCCCCAGGCCTAACCTAATGACTCCGGTCGAGAAGCCTTCCAAGAAGATAAAGCAAATAACTCCTGAGATGCCTATTAAACCTTCATCGCTCGAGGTGGTGACCATTTTTAGGAGTCAGAGATGCTGCAGAGGGGCTGACATACTTATAAATGAGATATGCTGTACTTGTCACTCATCATTCCCTTCTTGTCGTGCTAGCAGCCAGAGTTCTCTCGCCAGACTTGCTCCACTTGAAGCAGTGCTCTTTGACGTAGATGGAACACTATGTGATTCTGATCCTCTTCACTACCTTGCCTTCCGTGAAATGCTTCTAGAGGTTGTGTCTTTTCTTAGTCGAAAAATTGGTTTCAATGGAGGTGCCCCTATAACGGAGGAATTCTTTATTCAAACTGTTGCCGGCAAACACAATGATGATATAGCCAAGGCTCTCTTTCCTGATGATCTGCAACGAGGTTTAAAGTTTGTAGATGATAAGGAAGCCTTGTTCCGGAGAATGGCAAAAGAGCAACTGAAGCCTTTGAATGGCCTTGATAAAGTGAGGAAATGGATTGAAAGTCATGGGTTGAAGAGAGCTGCAGTTACCAATGCTCCAAGAGCAAATGCAGAACTCATGATCTCCTTACTCGGTCTCTCAGATTTTTTTGATGCTGTCATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGACCCCTACCTGAAAGGTCTTGAAGCTCTGAAGGCATCAAAGGATCACACATTTGTATTTGAGGATTCTTTTTCAGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTTATTGGTTTGGCTACTCGAAACCCAGAAAATTTATTGATGGAAGCAAAACCTACATTTCTGATCAAGGACTATGAGGATCCAAAATTGTGGGCTGCTTTGGAAGAACTTGACAAGGCTAGCAGTGCTCCCTCAGTTTGA 1197 0.4461 MITPLDFLGSRACCSRNPSGCICSGKRSPFRPKGVDWKMLPGGRVKKKGSLKGSLRNVLGGLKVSKPPKPAKEPPKLKKGSMPPLCPRPNLMTPVEKPSKKIKQITPEMPIKPSSLEVVTIFRSQRCCRGADILINEICCTCHSSFPSCRASSQSSLARLAPLEAVLFDVDGTLCDSDPLHYLAFREMLLEVVSFLSRKIGFNGGAPITEEFFIQTVAGKHNDDIAKALFPDDLQRGLKFVDDKEALFRRMAKEQLKPLNGLDKVRKWIESHGLKRAAVTNAPRANAELMISLLGLSDFFDAVIIGGECEHAKPHPDPYLKGLEALKASKDHTFVFEDSFSGIKAGVAAGMPVIGLATRNPENLLMEAKPTFLIKDYEDPKLWAALEELDKASSAPSV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00500 398 MobiDBLite consensus disorder prediction 61 93 - -
Spst2g00500 398 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 163 379 - -
Spst2g00500 398 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 155 392 - -
Spst2g00500 398 CDD HAD_BPGM-like 165 358 - -
Spst2g00500 398 Gene3D Putative phosphatase; domain 2 178 254 IPR023198 -
Spst2g00500 398 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 300 316 IPR006439 -
Spst2g00500 398 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 269 282 IPR006439 -
Spst2g00500 398 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 163 174 IPR006439 -
Spst2g00500 398 SUPERFAMILY HAD-like 159 388 IPR036412 -
Spst2g00500 398 Pfam Haloacid dehalogenase-like hydrolase 166 355 IPR041492 -
Spst2g00500 398 Gene3D - 164 379 IPR023214 -
Spst2g00500 398 NCBIfam HAD-IA family hydrolase 247 355 IPR006439 -
Spst2g00500 398 SFLD Haloacid Dehalogenase 163 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00500 Spst-Chr2 4057581 4067221 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00500 - - gmx:100793483 432.18