Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst2g00499 | ATGTCAAGAACAGTGGAAATCACAATTTTATCCGCAGAGAATCTTCAAGTGAACAGAAAACCCGTCAAAGGAAATACATTTGTGGCTGTTCACTCCGACGCTAGCAGCGACGCAAGTCCTGTCACGAAAGTGGATTCAGAGGGTGGAAGTTACCCTTCGTGGAATGAGAAGGTTGTGGTGAACGTGCCGTTGCATGCAAGGTTCATAACCGTTGAGGTGAAGTGCAAAACGTCGTCGTCATCGACGGGGTCTAACAGTGTTGGCGTGGCTCGAATACCGGTTTCTGATTTCATTGGAGGATACGTTCCAGAAAATCAGTTGCATTTCTTGAGCTATAGGTTGTGGGACTGTAACGTTAGGAGAAATGGGGTTATTAACATTTCGGTGAGGGTGAAAGTACCCGAACGTTCTTCTTGTACCTCCAATTCTGTGTCGTTTTCGGCGGTAACTGGGGTGCCGGTGGCCGTTAATGGCTCCACCGGAGTTGTCACAGGGATTCCGGCTCTTTGGTTAAACTACCAAAGGAACCTTTGA | 534 | 0.4775 | MSRTVEITILSAENLQVNRKPVKGNTFVAVHSDASSDASPVTKVDSEGGSYPSWNEKVVVNVPLHARFITVEVKCKTSSSSTGSNSVGVARIPVSDFIGGYVPENQLHFLSYRLWDCNVRRNGVINISVRVKVPERSSCTSNSVSFSAVTGVPVAVNGSTGVVTGIPALWLNYQRNL | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst2g00499 | 177 | Pfam | C2 domain | 4 | 102 | IPR000008 | - | |
| Spst2g00499 | 177 | Gene3D | C2 domain | 3 | 132 | IPR035892 | - | |
| Spst2g00499 | 177 | CDD | C2_SRC2_like | 4 | 127 | IPR044750 | GO:0006952 | |
| Spst2g00499 | 177 | SMART | C2_3c | 4 | 106 | IPR000008 | - | |
| Spst2g00499 | 177 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 130 | IPR035892 | - | |
| Spst2g00499 | 177 | PANTHER | INGRESSION PROTEIN FIC1 | 2 | 136 | - | - | |
| Spst2g00499 | 177 | ProSiteProfiles | C2 domain profile. | 1 | 108 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst2g00499 | Spst-Chr2 | 4048323 | 4048856 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst2g00499 | - | - | gmx:100500298 | 287.73 |