Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00497 ATGGAAGCTTTTGCGCAAAGGTGTGTATCTAGATGGTCCATTACACTTAATGCTCGTTACTCCGATACTCCTCAGAAGAAGTCTAAGCTTGCTCCATTGCAGGAGAGACGAATGATAGACCAGTGTAAGATATTTGCAAAAGCAGGTGATGGAGGTAATGGTTGCTCCAGCTTGCGCAAGGGAAAGCCTGATGGTGGTAATGGGGGGAGGGGTGGTGACGTGATTCTGGAATGCTCTCCCAGAGTTTGGGACTTCAGTGGCTTACAGCGTCACCTTATAGCCGAGAAAGGAGGACCTGGATCATCAAAAAAGCTGATAGGTAGCAGGGGTGCTGATAAGGTTGCCCGCGTGCCCATCGGAACTGTACTTCATCTTGTTAATGGTGATCGTCCTTCCATTGTCAAAACTCAATCCTCGACTGATGTAGACCCTTGGGAGATTCCTGGGGCACTTGTTGATGATCTTCGTGACCCTGGCTATGGTCATGCCTCTAGTGTCACAAGTGGGAAAGTCGAAGCAATACATTCTATTGGCTGCTCCTCAGCACAAACTGAAGAAACAAATGCTAAGAAATCTGAAAAATCAAGACAAGTTGCATCAACAGATGTATTCTCTCAACTCTCTACTTCTAATGGAGCTCCCGAATTTTGTAGAGAGGATATAGAAGGGAACCAAGAGATACTATACAATGTTGCTGAGTTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGTGGAGGAGAGGGTGGTCTGGGCAATGTGTCTTGTTCCAAAGATTCCAGGAAATATGTGACTATGAAGGCAGGGGCATGTCAACACATACCTAATCTTCAGGACTCTGACAGTGTCCACTCCTCTCTGAATGCAGGTTCACCTGGTTCTGAGACCGTTCTAATATTAGAACTCAAGAGTATTGCTGATGTGAGCTTTGTGGGAATGCCTAATGCTGGTAAAAGTACTTTACTTGGGGCTATATCAAGGGCTAAGCCTGCTATTGGTGACTATGCGTTTACTACTCTTAGGCCAAATTTGGGGAATCTAAACTATGATGATTTCTCAATAACCGTGGCTGATATTCCTGGACTTATAAAAGGTGCACATCAAAATCGTGGACTCGGGCATGCATTTCTACGCCACATAGAACGCACAAAGGTTCTTGCTTATGTGGTAGACTTGGCTGCTGCTTTAAATGGAAGAAAGGGAATTCCACCATGGGAACAGCTGAGAGACTTAATTCTAGAGCTAGAGTACCATCAGGATGGTTTGTCCAATCGGCCATCTCTGATAGTTGCAAATAAGATTGATGAGGAAGGTGCAGATGAAGTGTATAAAGAATTAAAGAGAAGGGTACAAGGTGTTCCCGTATATCCTGTATGTGCTGTTTTGGGTGAAGGCATAGCAGATCTGAAAGATGGCCTTAAAATGCTTGTCAATGCCGAAATGTCATATAAACTTTGTCTAGATCAAATTTTGCTCGCTTAG 1482 0.442 MEAFAQRCVSRWSITLNARYSDTPQKKSKLAPLQERRMIDQCKIFAKAGDGGNGCSSLRKGKPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGPGSSKKLIGSRGADKVARVPIGTVLHLVNGDRPSIVKTQSSTDVDPWEIPGALVDDLRDPGYGHASSVTSGKVEAIHSIGCSSAQTEETNAKKSEKSRQVASTDVFSQLSTSNGAPEFCREDIEGNQEILYNVAELTEEGQQIVIARGGEGGLGNVSCSKDSRKYVTMKAGACQHIPNLQDSDSVHSSLNAGSPGSETVLILELKSIADVSFVGMPNAGKSTLLGAISRAKPAIGDYAFTTLRPNLGNLNYDDFSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLRDLILELEYHQDGLSNRPSLIVANKIDEEGADEVYKELKRRVQGVPVYPVCAVLGEGIADLKDGLKMLVNAEMSYKLCLDQILLA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00497 493 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 25 474 IPR045086 GO:0003924|GO:0005525
Spst2g00497 493 SUPERFAMILY Obg GTP-binding protein N-terminal domain 38 263 IPR036726 -
Spst2g00497 493 MobiDBLite consensus disorder prediction 51 71 - -
Spst2g00497 493 Pfam 50S ribosome-binding GTPase 308 433 IPR006073 GO:0005525
Spst2g00497 493 Pfam GTP1/OBG 39 124 IPR006169 -
Spst2g00497 493 Gene3D GTP1/OBG domain 38 304 IPR036726 -
Spst2g00497 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 307 477 IPR027417 -
Spst2g00497 493 PIRSF GTP-binding_obg 35 487 IPR014100 GO:0000287|GO:0003924|GO:0005525
Spst2g00497 493 Gene3D - 305 485 IPR027417 -
Spst2g00497 493 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 306 478 IPR031167 GO:0005525
Spst2g00497 493 MobiDBLite consensus disorder prediction 181 203 - -
Spst2g00497 493 CDD Obg 306 477 IPR031167 GO:0005525
Spst2g00497 493 PRINTS GTP1/OBG GTP-binding protein family signature 373 391 IPR006073 GO:0005525
Spst2g00497 493 PRINTS GTP1/OBG GTP-binding protein family signature 329 347 IPR006073 GO:0005525
Spst2g00497 493 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Spst2g00497 493 PRINTS GTP1/OBG GTP-binding protein family signature 308 328 IPR006073 GO:0005525
Spst2g00497 493 ProSiteProfiles Obg domain profile. 36 305 IPR006169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00497 Spst-Chr2 4043187 4045239 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00497 - - gmx:100808337 836.639