Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00488 ATGTCATGGGAACAAGTTTTAAGATATGCCAGCTTGAGGAAGAGATATATCTCTTTGTATGCTTCACTACTTAAATCTGACCCCACTCAGGTGACAATTAGTGGCAACAAAGAGATTGAAGACCTAGATCGGGAACTTGATATTGAACTCATATTGCAATGGAGAATGTTGGCTCACAAGTTTGTGGAGCAATCAGCAGAGTCAAACCATAACATGAGGAAACAGAAAGCTCAAAAATCTTGGACTAGTGAATCTCCTAAAGAGGAAAGTGAGGAATTTAGGTTCAGTGAAGAGGACTGGAACCAGTTGAATAAAATAATAGGATATAAGGAGGGTGATGATGGACAATTGGCTGTAAATAGCAAGGAGGATGTTATCCATACTTTTCTGGAAGTTCACATGAATCATAATGCTTCAAAGCTTATCGGGGAAACCAAAGAGTCTGTTGCTGAATTATCATGTGAAGACCTCAGTTGCTCAATAAAACTTTATCCAGAAACAAAGGTCTTTGACATTAAGTTGGGCTCCTATAAGTTATCATCACCAAAAGGTCTCCTTGCAGAGAGTGCAACTTCCTATGACTCATTAGTTGGTGTCTTCCATTACAAACCTTTCGATGACAAGGTGGACTGGAGGATGGTTGCCAAAGCATCTCCATGTTACATGACTTACATGAAGGACAGCATTGATCAAATTCTGAAATTCTTTGAAAGTAATACTGCTGTAAGTCAGACCATAGCACTAGAAACTGCAGCTGCTGTTCAGATGACAATTGATGAAGTGAAGCGCACTGCACAACAGCAAATGAATAGAGCATTAAAGGATCATGCCAGTGATGTATCAGCATTTTTGTTTGATGGGGACTATCACTGGAGCCAAGTTTCTATGAATAAGTCTGCCCATTCAACTAGCAACAGTTTCTTCCCAATTATTGACAAGTGTGGAGTCATCTTACAGCTTCAACAGATTCGTTTAGAGACTCCATATTATCCTGCAACACGCCTTGCTGTGAGGCTTCCATCATTGGGCTTTCATTTTTCACCTGCTCGGTATCATCGGCTGATGCATGTGATAAAGATTTTTGAGGAGGACGATGGTGACAGTTCTGAGTTTCTTCATCCTTGGAATCAGGCTGATCTTGAGGGTTGGTTGTCTCTTTTAACTTGGAAGGTAGTGATCTCATTAGACCCTTTTGGTAAGCTCTATTGGCTCTATCGTTGTCCATGTAGCACTAATCTGGATTTTTATTGGATTACATTTAAGGACTACAGTCAGTTTCTTCAGTTAGCTTTGGTTGAGGTCGATGTTGATATGTTTGAGGGATCCCTCAGCCAGAGGCTCCAATGTGGGAACATCTTGATTCACCTAATGAATAGATGGAAGGGGCACAAGAACAAGTTGTCACCCCAATCGGGCAATCATAGTGTTGCCGATAGTGCGTCAACCGGTGCATGCGCACCTCATCTCCAACATGTTGTCTTCAACCCAGCTCGCGACTACTATACATGGCGGTGCATTTGGCCAAAATTTTGGCAGAAAATCTTCGGTGTTGAACTCAACTTGTTATCCCTCTTTCTAGATTTGTCCCGGCCTTTCCTTGAGCATGATGGAGATGATGGCCTCAAGTGTGTGAGTGTGTCAGAGAATTCTCTTACCAATGGTGATTTTCATGGCTTCGTGCAACAGAGAGAGAACCGAGAAGAAGGTCTTTTAAGTGAGTTGTTAGGTTTTGATGCTCCAATTTCTGGACTATCTGAAACCTCATCAGATCAGGAGGATACTGAATCTGAACATGATATTGATGTAGGGATTGCTGAAAGTTTGTTTGTAACAGGTGTTCTTGATGAGTTAAAGATTTGCTTCAGTTATAGTTATCAGTCGGATCAGAGCTTAATGAAAGTTCTCTTAAATGAAGAAAATCAATTGTTTGAATTTCGGGCAATAGGCGGTCAGGTGGAAGTTTCTATCAGAGACAATAACATTTTTGTTGGCACTATCTTGAAGTCTTTGGAAATAGAAGATTTAGTTTGCTATAGTCAACAATTGTCCCAGCCTTGTTTTTTGGCAAGATCTTATATTGGGACTGCGGCTGAAAATTCATTACTTTACAATACCGTGAGAGAAGATGTTGAAAGTGGTGGATTCATTCCTACTGAAACTGATGATAAGTTTTATGAGGCACCTGAGACTTTAGCAGAAAGTGCTGAGTATCCTATGCAGTCTCCTGGAGGTACATCAGAATACCGAACTAGTTCGGCCAGTGACATCCAATTAAATAATTCATCTCTGAAACCCCCAAAGTTTAGTCGCATTACTGGACTTCTACCTTGTGACTCTTCTTCTAGTAGGAAGGAGCTACAACTCCATGACACATTGGAGAGTTTTGTCAAAGCTCAAATAATTATCTATGACCAGAATTCTTCTCAGTATAAGAATATAGACAAGCAGGTGATAGTTACTCTGGCTACGTTGACATTTTTCTGTCGAAGACCAACAATCCTTGCCATTATGGAATTTATTAATTCCGTGAGTATTGAGGATGAGAGCCTTGCAACTTCTAGTGGTATCCCTTCAACAGCCAGAATTAAAAATGATGTTTCAGGAGATGTAGATGATGTACAATCTACTGGTGTTGAGGATCATGCTGTTAAGGGCTTGTTTGGAAAAGGTAAATCCAGAGTTATGTTCAATCTGACATTAAAAATGGCACAGGCTCAAATCCTTTTGATGAAGGAAAATGAAACCACACTTGCTTGTTTGTCTCAAGAGAGTTTGCTTACAGAAATCAAGGTGTTCCCTTCCTCCTTTAGTATTAAAGCAGCATTGGGGAATCTAAAAATCAGTGATAATAGCCTACATAGCAGTCATTTATATTACTGGGCATGTGATATGAGAAATCCCGGGGGCAGATCTTTTGTGGAGTTGGAGTTCACATCATTTAGCAACGATGATGAAGACTATGAAGGTTATGATTTCAGTCTTTTTGGAGAACTTTCAGAAGTGCGCATTGTGTATCTGAATCGATTTGTGCAGGAGGTTATTGGCTACTTCATGGGTCTTGTTCCAGACAGCCCAAAGAGTGTTGTTAAAGTAACAGATCAAGTCACAAATTCAGAGAAGTGGTTTTCAGCTAGCGAGATTGAAGGATCACCGGCTGTGAAGTTTGATCTTTCTCTCAAGAAGCCTATAATATTAATGCCACGGAGGACAGATAGCCTTGATTTTCTGAAGCTTGATATTGTTCATATAACTGTGAAGAACACATTTCAGTGGATTGGTGGAAGTAAAACTGAGATTAATGCAGTGCACTTGGAAACATTGACTGTCCAGGTTGAAGAAATCAACTTGAACGTTGGAACTGGATCAGACATAGGTGAAAGCATAATTCAGGATGTGAATGGGCTATCTGTGATTATTCACCGGTCACTTCGAGACTTATTACATCAATTTCCAAGTATTGAAGTTATAGTCAAGATTGAAGAGTTGAAGGCAGAAATGTCAAATAAAGAATATGAAATCATTACTGAGTGTGCTGTCTCTAACTTTTCTGAGGTCCCACATATTCCTACACCGTTGAATCAATATTCCTCCATGACATTAAATGATGCAACAGGAGATGTTGCCCCTGAGGTTACTAATGGTGATTCAGGGACCACAAATGTTGAAGCCTCTGTCCTTCTGAAAGTCAGCAGTGCATGGCTGCTGTATAAGTCCAGTACAGCAGGAAATGGATTCCTCTCTGCAACACTGCAAGGTTTCAGTGTGTTTGATGATCGTGAGGGAGTTGAACAAGAATTTCGGTTAGCAATAGGAAAGCCTGAGGATGTAGGACCCAATCCTATAAATACTTCTTCATATGATCAAAACAAGGACTCAGTTGATAGTAGCTTAATCAAGGGAAATGATTTCGATCTAGTTCAGACAATGCTCATTGTTGATGTAAAATTTGGTCAGGATTCGACATTTGTTTCTTTGGGTGTCCAGAGGCCTCAGTTGCTTGTTGCACTAGATTTTCTTCTTGCTGTAGTTGAGTTTTTCGTTCCAACAGTCAGCAGTATGCTATCAGTTGAAGAACCTAGGTCTGACATGCTCGAAGCTATCATCATCGATCAATCAGTCTACAAGCAACCTTGTGCTGAATTTTCCTTGTCACCTAAAAAGCCTTTAATAGTTGATGATGATAGTTTTGATCACTTTATTTACGATGGTGATGGTGGAATATTATATTTAAAGGATAGACAAGGTTTTAATCTTGCAGCAGCTAGCCCAGAGGCTATAATATACATTGGAGAAGGGAAGAGGTTGCAGTTCAAAAATGTTGTTATTAAGGGTGGAAAGCATTTGGATTCTTGTGTATTTCTTGGAGCAAACAGTAGCTATTCAGCTTTAGAGTCTGATCACGTTTACTTGGAAGAATTAGTTGAAAGTCCTCAGTCTAGGTCTGTGAGAGGAAGTGACGAAGTACCATGTCAGAATAATGCTGTTAACAACTCCACAGAACTGATCATTGAGCTTCAGGCTGTTGGCCCTGAGCTTACCTTTTATAACACCTCAAAAGATGTAGGAGAGTTATTAAACCTATCTAATAAACTTCTACTTGCACAGTTGGATGCATTTTGCAGGTGA 4626 0.4001 MSWEQVLRYASLRKRYISLYASLLKSDPTQVTISGNKEIEDLDRELDIELILQWRMLAHKFVEQSAESNHNMRKQKAQKSWTSESPKEESEEFRFSEEDWNQLNKIIGYKEGDDGQLAVNSKEDVIHTFLEVHMNHNASKLIGETKESVAELSCEDLSCSIKLYPETKVFDIKLGSYKLSSPKGLLAESATSYDSLVGVFHYKPFDDKVDWRMVAKASPCYMTYMKDSIDQILKFFESNTAVSQTIALETAAAVQMTIDEVKRTAQQQMNRALKDHASDVSAFLFDGDYHWSQVSMNKSAHSTSNSFFPIIDKCGVILQLQQIRLETPYYPATRLAVRLPSLGFHFSPARYHRLMHVIKIFEEDDGDSSEFLHPWNQADLEGWLSLLTWKVVISLDPFGKLYWLYRCPCSTNLDFYWITFKDYSQFLQLALVEVDVDMFEGSLSQRLQCGNILIHLMNRWKGHKNKLSPQSGNHSVADSASTGACAPHLQHVVFNPARDYYTWRCIWPKFWQKIFGVELNLLSLFLDLSRPFLEHDGDDGLKCVSVSENSLTNGDFHGFVQQRENREEGLLSELLGFDAPISGLSETSSDQEDTESEHDIDVGIAESLFVTGVLDELKICFSYSYQSDQSLMKVLLNEENQLFEFRAIGGQVEVSIRDNNIFVGTILKSLEIEDLVCYSQQLSQPCFLARSYIGTAAENSLLYNTVREDVESGGFIPTETDDKFYEAPETLAESAEYPMQSPGGTSEYRTSSASDIQLNNSSLKPPKFSRITGLLPCDSSSSRKELQLHDTLESFVKAQIIIYDQNSSQYKNIDKQVIVTLATLTFFCRRPTILAIMEFINSVSIEDESLATSSGIPSTARIKNDVSGDVDDVQSTGVEDHAVKGLFGKGKSRVMFNLTLKMAQAQILLMKENETTLACLSQESLLTEIKVFPSSFSIKAALGNLKISDNSLHSSHLYYWACDMRNPGGRSFVELEFTSFSNDDEDYEGYDFSLFGELSEVRIVYLNRFVQEVIGYFMGLVPDSPKSVVKVTDQVTNSEKWFSASEIEGSPAVKFDLSLKKPIILMPRRTDSLDFLKLDIVHITVKNTFQWIGGSKTEINAVHLETLTVQVEEINLNVGTGSDIGESIIQDVNGLSVIIHRSLRDLLHQFPSIEVIVKIEELKAEMSNKEYEIITECAVSNFSEVPHIPTPLNQYSSMTLNDATGDVAPEVTNGDSGTTNVEASVLLKVSSAWLLYKSSTAGNGFLSATLQGFSVFDDREGVEQEFRLAIGKPEDVGPNPINTSSYDQNKDSVDSSLIKGNDFDLVQTMLIVDVKFGQDSTFVSLGVQRPQLLVALDFLLAVVEFFVPTVSSMLSVEEPRSDMLEAIIIDQSVYKQPCAEFSLSPKKPLIVDDDSFDHFIYDGDGGILYLKDRQGFNLAAASPEAIIYIGEGKRLQFKNVVIKGGKHLDSCVFLGANSSYSALESDHVYLEELVESPQSRSVRGSDEVPCQNNAVNNSTELIIELQAVGPELTFYNTSKDVGELLNLSNKLLLAQLDAFCR 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00488 1541 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 579 1537 - -
Spst2g00488 1541 MobiDBLite consensus disorder prediction 67 94 - -
Spst2g00488 1541 MobiDBLite consensus disorder prediction 80 94 - -
Spst2g00488 1541 Pfam Repeating coiled region of VPS13 295 359 IPR031642 -
Spst2g00488 1541 Pfam Repeating coiled region of VPS13 201 277 IPR031642 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00488 Spst-Chr2 3902452 3919928 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00488 K19525 - gmx:100780088 1615.9