Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00475 ATGGTTCAATTCCACGAGCACATCATCACAGAGCTTCTAGAAGATTCTAATGGCGGTCTCGTCGTTCTCTCCTCCGGTCTCTCTCTCTCTAAACTCGTCTCTTCTCTCCTTCTTCTACACTCCTCGTCCGAGGGAACGCTCCTTCTTCTCTATCCTTCCTCCACTTCACTCAAATCCAACATCACCTTCCACCTCAAAACCCTAAACCCCCAATTCAACCAGATCCCCGCCGAAATCACCGCCGACCTCCCCGCTCATCATCGCCACTCGCTCTACTCCTCCGGTAATGCCTTCTTCATCACGCCGCGCATCCTAATCGTCGACCTCTTGACTAACAAGTTACCGACCTCCAAAATAGCTGGCATCCTCGTCCTCAATGCGCACTCTCTCTCCGAGACGTCCACTGAAGCGTTCATCGTTCGGATTTTCCGGTCGCTCAACCGCGGAGCGTATGTGCGCGCTTTCTCCGACAAGCCGCACGCGATGGTGTCGGGGTTCGCGAAGGCGGAGCGGACGATGAAGTGCCTGCACGTGCGTAAGCTGCACCTGTGGCCACGGTTTCAGGTCTACGTGTCGCAGGAGCTGGAGAGGGACCCGCCGGAGGTGGTGGATATAAGGGTGCCGATGACAAAGTACATGGTGGGGATTCAGAAGGCCATTATTGAGGTCATGGATGCGTGTTTGAAAGAGATGAGGAAGACGAACAAGGTCGACGTGGAGGATTTGACGGTGGAGAATGGGTTGTTTAAGTCATTTGATGAGATTGTGAGGCGACAGTTGGATCCAATTTGGCACACTTTGGGGAAGAAGACCAAGCAGCTCGTCTCAGACCTTAAGACATTGAGGAAACTTTTGGATTATTTAGTCAGGTATGATGCGGTAACTTACTTGAAATATTTGGATACACTGAGAGTGTCAGAGAGTTTTCGGTCTGTTTGGATATTTGCGGAGGCGAGCTATAAGATATTTGATTACGCAAAGAAGCGTGTTTTTCATCTTGTGAGGTCGGATGGCATGAAATTTAATGAGTTGAGTAAGGGTGTAAAAAACAAAAAGAGAAAAAGCAAGGGTGATGACAAAGACATAGAAGAAGTTGATGGTACTTCATCATCTAGTTCGAATGCCTTAGTTTTGGAAGAAGTTTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGAGGTTCTTGAGGAAATAGAAGAGGAAAGACAAAAGCAAGGTATGTTAAGGGAAGAATTATTTGCTGAAGGTGAAGACACCGACAATGGCATTGTATTAGTGGCATGTAAAGATGAAATGTCATGCTTGCAAATTGAAGAATGCATCACCAACAGTCCAAAAAAGGCCATGCATGAAGAATGGAAGAAGTACTTACTAAACAAAGTACAGCTGCGTGACATAGTGAATAAGAAAAAGAAGCCTAAGGATCCTAAACCCAAAGGTTTTGGGATTCTTGATGGAGTTACTCCCATAACACCTGCTCAGAATGCAGAAACCACCAGCATTGGTAAGCAGGAACATGATGCGCTTTTGGCAGCTGCATCAAAACTTAGAAATGTTTCTGAAAATGACCATGTTGTTGAGGACACTCCGCAGCCTGATTTTGGTGGACAGGGTCGTGGTAAAAGAAAGAGAAAAGTGGGGATTAGAAATGTCCCCATTGTTCTTGATGGCTCTGGAGTTCAGAACAATGATAAAGAGGAAGCAGTGAGTAATAAAATTGGGATGTCTGATTCAAAAAACAAAATCAATGAAGATGAGACTAATCCTGTCAGTACCGCTAGATTTTCTGGTACCACAGACGAAGGGATTTCTGTGGAAAACATAGTTCTTCGGAAGCATACAAATACTGATGTTGCAGCAAGAAATGGGAAGCCACTACCACCAGTGCATTTTTATGCCCTAGAAAGTGATCAACCTATACTGGATATATTAAAGCCCTCCGTATTAATTGTTTACCATCCTGACATGGCCTTTGTTAGGGAAATCGAAGTCTACAAAGCTGAGAATCCCTCAAAACGGTTAAAAGTATATTTTCTTTTCTACGAAGATTCAACGGAGGTGCAGAAGTTTGAGGCAAGTATACGCAGAGAGAATGGAGCATTTGAATCTTTGATTAGGCAAAAATCTATGATGATGATTCCAGTTGACCAGAGTGGGCATTGTTTAGGATTGAATTCTACATTAGAATCAGATTTAAATACTCCTCAAAACTCAGTAACCAGAAAAGCAGGTGGGAGAAAGGAGGCTGATAAAGAAATGCAGGTTATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAATGTTCTTCATCAGAAGGGAATGCGCATAGTTCCAGTGACCCTAGAAGTTGGGGACTATATCCTATCACCGTTAATCTGTGTGGAAAGAAAAAGTATTCAGGATCTCTTTATGAGCTTCACATCAGGTCGTCTATTCCACCAGGTCGAGACAATGGTACGATATTACAGAATACCTGTTCTCTTGATTGAGTTTTCACAGGATAAGAGCTTCTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCCAATAGCATTATATCAAAGTTGTCTTTGCTTGCTCTACACTTCCCCAGGCTACGGATAATCTGGTCTCGAAGTCTGCATGCTACTGCTGAAATATTTGCTTCACTCAAGGCAAATCAAGACGAGCCAGATGAAATAAAAGCAATCAGAGTGGGTGTTCCCTCAGAAGAAGGCATTGTGGAAAATGATGTGAGGGCTGAAAATTACAATACATCGGCTGTGGAGTTTTTAAGACGACTTCCAGGTGTTACGGACTCAAACTACAGGGCCATAATGGATGGGTGTAAGAGCATGGCAGAACTTGCACTTCTTCCTGTTGAGAAGCTAGCGGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTTAGAGACTTTCTAGATGCTAAATACCCAACGTTGTTGTAA 2958 0.4432 MVQFHEHIITELLEDSNGGLVVLSSGLSLSKLVSSLLLLHSSSEGTLLLLYPSSTSLKSNITFHLKTLNPQFNQIPAEITADLPAHHRHSLYSSGNAFFITPRILIVDLLTNKLPTSKIAGILVLNAHSLSETSTEAFIVRIFRSLNRGAYVRAFSDKPHAMVSGFAKAERTMKCLHVRKLHLWPRFQVYVSQELERDPPEVVDIRVPMTKYMVGIQKAIIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRSDGMKFNELSKGVKNKKRKSKGDDKDIEEVDGTSSSSSNALVLEEVLEEAPKWKVLREVLEEIEEERQKQGMLREELFAEGEDTDNGIVLVACKDEMSCLQIEECITNSPKKAMHEEWKKYLLNKVQLRDIVNKKKKPKDPKPKGFGILDGVTPITPAQNAETTSIGKQEHDALLAAASKLRNVSENDHVVEDTPQPDFGGQGRGKRKRKVGIRNVPIVLDGSGVQNNDKEEAVSNKIGMSDSKNKINEDETNPVSTARFSGTTDEGISVENIVLRKHTNTDVAARNGKPLPPVHFYALESDQPILDILKPSVLIVYHPDMAFVREIEVYKAENPSKRLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHCLGLNSTLESDLNTPQNSVTRKAGGRKEADKEMQVIVDMREFMSSLPNVLHQKGMRIVPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLFHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDEIKAIRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSMAELALLPVEKLAELMGGHKAARTLRDFLDAKYPTLL 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00475 985 FunFam DNA repair endonuclease XPF 754 898 - -
Spst2g00475 985 FunFam DNA repair endonuclease UVH1 912 984 - -
Spst2g00475 985 SUPERFAMILY Restriction endonuclease-like 751 889 IPR011335 -
Spst2g00475 985 CDD XPF_nuclease_XPF_euk 754 888 IPR047520 -
Spst2g00475 985 MobiDBLite consensus disorder prediction 577 597 - -
Spst2g00475 985 SUPERFAMILY RuvA domain 2-like 916 980 IPR010994 -
Spst2g00475 985 Pfam ERCC4 domain 757 886 IPR006166 GO:0003677|GO:0004518
Spst2g00475 985 Coils Coil 391 415 - -
Spst2g00475 985 Gene3D - 912 983 - -
Spst2g00475 985 SMART ERCC4_2 754 834 IPR006166 GO:0003677|GO:0004518
Spst2g00475 985 Gene3D - 754 900 - -
Spst2g00475 985 MobiDBLite consensus disorder prediction 350 369 - -
Spst2g00475 985 PANTHER DNA REPAIR ENDONUCLEASE XPF 1 984 - -
Spst2g00475 985 MobiDBLite consensus disorder prediction 350 366 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00475 K10848 - gmx:100812359 1681.38