Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00467 ATGGCTTCTCAAGTTCTTCTTCAGCAGGCCCTGTTTGCCCCTAAGCTCACTTTTCCTCCTCCTCCTTCTTCTTCTTCTTCCCATCGTAACGTTGCGTTAATATCTAGGGTTCCTTCGACTCCAATTTCATGGCGTTGCACTCCTCTTATTGTTAAGCCTAGTTTCGTTGTCAGAGCCGATTCCAACCTCGAAGGCGGTGGTGAAACCACCGAAGATGTTCCTTCCGATAATGTTGATGAAGTTTCGGAAGGTGAAGCGGAACAGGTTTCGGATTCCGAAGCTCCGAAATCGCCCCGAAAACCCAGAGTCAAGCTTGGAGACGTTATGGGGATATTGAATCAGAGGGCAATTGAGGCATCGGAGAAGGAAAGACCAACACCAGACATTAGGACTGGGGATATTGTGGAAATCAGATTGGAGGTTCCGGAGAACAAGCGTAGGTTGTCCATTTATAAAGGGATTGTCATCTCAAGACAAAATGCTGGTATTCACACCACCATTCGAATCCGAAGAATCATTGCCGGCACTGGTGTTGAGATAGTCTTCCCAATTTACTCGCCAAACATCAAAGAAATCAAAGTGGTAAGCCACCGCAAGGTTAGGAGGGCAAGATTGTACTACCTGAGAGACAAGCTTCCGAGATTCTCCACTTTCAAATGA 660 0.4667 MASQVLLQQALFAPKLTFPPPPSSSSSHRNVALISRVPSTPISWRCTPLIVKPSFVVRADSNLEGGGETTEDVPSDNVDEVSEGEAEQVSDSEAPKSPRKPRVKLGDVMGILNQRAIEASEKERPTPDIRTGDIVEIRLEVPENKRRLSIYKGIVISRQNAGIHTTIRIRRIIAGTGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00467 219 MobiDBLite consensus disorder prediction 62 102 - -
Spst2g00467 219 NCBIfam 50S ribosomal protein L19 117 211 IPR001857 GO:0003735|GO:0005840|GO:0006412
Spst2g00467 219 Gene3D - 105 218 IPR038657 -
Spst2g00467 219 MobiDBLite consensus disorder prediction 73 87 - -
Spst2g00467 219 FunFam 50S ribosomal protein L19, chloroplastic 106 218 - -
Spst2g00467 219 Pfam Ribosomal protein L19 116 212 IPR001857 GO:0003735|GO:0005840|GO:0006412
Spst2g00467 219 PRINTS Ribosomal protein L19 signature 113 142 IPR001857 GO:0003735|GO:0005840|GO:0006412
Spst2g00467 219 PRINTS Ribosomal protein L19 signature 172 195 IPR001857 GO:0003735|GO:0005840|GO:0006412
Spst2g00467 219 SUPERFAMILY Translation proteins SH3-like domain 116 219 IPR008991 -
Spst2g00467 219 PANTHER RIBOSOMAL PROTEIN L19 29 219 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00467 Spst-Chr2 3676540 3678431 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00467 K02884 - gmx:100500328 359.762