Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00377 ATGGAGTGGCCTGCGTGTACGGACGAATACGAAAAGCTTATAATACGGATGAGCACTCCCAGGGTTGTCATTGACAATTCCGTGTTCTCTTCAGCTACTCTAGTGAAGGTTGACAGCGCTAGAAGGCTTGGTATTCTACTGGATGCTGTACAAGTGCTCACTGACCTGGACCTTTCTATTAAGAAAGCCTATATTTCTGCAGATGGCAAGTGGTGTATGGATGTTTTTCATGTCACTGATCAAAACGGAAACAAGATAACGGACGAGAGCGTTTTAAAATATATTGAGCAGTCACTTGGGAGCAGTCAATATGGGAGAATCAAGAGTTCTAATGGTCTCACTGCTCTGGAATTGACAGGAACTGACCGAGTTGGTCTTTTATCGGAGGTGTTTGCAGTACTGGGTGATCTTCAATGTGATGTGGTTGAGGCCAAGGTTTGGACTCACAATGGGCGTATTGCTTCCCTAATCTATGTAAAAGATTCTAGTTCTGGGTCTACTATTGAGGACTCTCAGAAAATTAATAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAAGATTTCTGTTTCCATCTCTGCAATGCACACTGAAAGAAGGCTACATCAAATGATGTTCGCGGACCGTGATTATGAGAGGACTCCCATTCTCAAGTTTACTTCTGAGAACCCATTGGTGACGGTTCAGAATTGGGCAGGAAGGGGGTACTCAGTCGTGAATGTTCAGTGTAAAGACCGAACCAAGCTTTTATTCGATGTAGTATCCAATTTGACAGACATGGAATATGTTATATTTCATGCAACTATTAACACAAATGATGGCCGAGCATACTTGGAGTTTTATATAAGGCACAAGGATGGCACTCCAATTAGTTCAGAACCAGAGCGTCAACGTGTAATTCAATGCTTAAAAGCTGCAGTAGAGAGAAGGGCATCTGAGGGTGTTCGACTAGAGTTATGCAAAGAAGACAGTCAGGGGCTTCTAGCGGAAGTAACAAGGACTTTCCGTGAGAATGGGCTCAATGTGACCAGGGCTGAGATATCCACCGTTGGGAATATGGCCACAAATATATTCTATGTAACGGATGCCATTGGAAATCCAGCTGATTCAAAAATTATCGAATCTGTTAGGCAGAAAATTGGGTTAAGCAATTTAGAAGTGAAGGAATTGCCGATGGTAAATCATCAGGAGATACAGAGAGAGGATGAAGCGGTTGGAATTGGTGGGGCAGTGTTGTTGTCCCTAGGGAGTCTCGTGAAAAGAAATCTGTATAATTTGGGACTAATCAAATCCTGTTCCTAA 1326 0.4253 MEWPACTDEYEKLIIRMSTPRVVIDNSVFSSATLVKVDSARRLGILLDAVQVLTDLDLSIKKAYISADGKWCMDVFHVTDQNGNKITDESVLKYIEQSLGSSQYGRIKSSNGLTALELTGTDRVGLLSEVFAVLGDLQCDVVEAKVWTHNGRIASLIYVKDSSSGSTIEDSQKINKIELRLRNVLKGDNDIRSAKISVSISAMHTERRLHQMMFADRDYERTPILKFTSENPLVTVQNWAGRGYSVVNVQCKDRTKLLFDVVSNLTDMEYVIFHATINTNDGRAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCKEDSQGLLAEVTRTFRENGLNVTRAEISTVGNMATNIFYVTDAIGNPADSKIIESVRQKIGLSNLEVKELPMVNHQEIQREDEAVGIGGAVLLSLGSLVKRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00377 441 CDD ACT_ACR_1 32 102 - -
Spst2g00377 441 SUPERFAMILY ACT-like 110 172 IPR045865 -
Spst2g00377 441 SUPERFAMILY ACT-like 30 97 IPR045865 -
Spst2g00377 441 CDD ACT_ACR_4 322 393 - -
Spst2g00377 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Spst2g00377 441 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Spst2g00377 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Spst2g00377 441 SUPERFAMILY ACT-like 244 312 IPR045865 -
Spst2g00377 441 Pfam ACT domain 331 384 IPR002912 -
Spst2g00377 441 Pfam ACT domain 116 169 IPR002912 -
Spst2g00377 441 CDD ACT_ACR_3 244 318 - -
Spst2g00377 441 SUPERFAMILY ACT-like 320 395 IPR045865 -
Spst2g00377 441 Gene3D - 113 187 - -
Spst2g00377 441 ProSiteProfiles ACT domain profile. 324 400 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00377 Spst-Chr2 2969664 2972093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00377 - - gmx:100780903 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00377 2 2969664 2972093 Spst2g00377 2 2969664 2972093 ECH